Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ctcataagcctccacacaattttctagagagagttttctgcaacatcttgatttgaatctgtgttgatattatcaataatttgttgatgggtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC

Basic information

species Vitis vinifera
transcript Vv15s0046g02420.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: LOC_Os02g44630.3 (Oryza sativa), 3'ss of exon 1
ctcata-agcctccacacaattttctagagagagttttctgcaacatct-tgatttgaatctgtgttgatattatcaataat-ttgttgatgggtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC
   ||| || ||     ||| | ||  || |           |||| ||  |      |   |   |  || |||| || || ||||   |   |     ||||||||||||| |||||||| || || ||||| ||| |||||||||| |||||||| || ||||| ||| | ||||||||  | ||||||||||| || ||
--tatacagtcttacttcaactgtcatgacaactgaccacaaaacaactacggcaattaagggcactactaatatccattatattgtctgttactgcaa-cagGAGGACACATCAACCCAGCAGTTACTTTTGGGCTGTTCTTGGCCAGGAAGCTGTCCCTGACCCGGGCCATCTTCTACATAGTGATGCAATGCCTAGGGGC

upper sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G392975_T01 (Zea mays), 3'ss of exon 2
---ctcataagcctccacacaattttctagagagagttttctgcaa-catcttgatttgaatctgtgttgatattatcaataatttgttgatgggtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC
   | |||     ||  || |   |     |   |     || ||| || |        |  |        || |     | |  || || ||        ||||||||||||| |||||||| ||||| || || ||| |||||||||| |||||||| || ||  | ||| | |||||||| ||||||||||||||||| ||
gaacccatgctattcagcaaagcataaaccaataacacgactacaagcaaccaagggcca--ccacaccactaatggttgttacctgctgctgcaac--aacagGAGGACACATCAACCCAGCTGTGACCTTCGGGCTGTTCTTGGCCAGGAAGCTGTCCCTGACTAGGGCCATCTTCTACATTATCATGCAATGCCTGGGTGC

upper sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AC209208.3_FGT002 (Zea mays), 3'ss of exon 1
----ctcataagcctccacacaattttctagagagagttttctgcaacatcttgatttgaatctgtgttgatattatcaataatttgttgatgggtttg-ggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC
         |||  ||||  |||||    |   | ||       ||| | |   | |  ||        || |  |  |||  ||  |   ||    ||   ||||||||||||| |||||||| ||||| || || ||| |||| ||||| |||||||| || ||  | ||| | |||||||| ||||||||||||||||| ||
gaactgtgaaagaatccatgcaattcagcaagcatagac-----caagaacacaactacaacaaccaaagacaccactaatggttgttacctgctactgcaacagGAGGACACATCAACCCAGCTGTGACTTTCGGGCTGTTCTTAGCCAGGAAGCTGTCCCTGACTAGGGCCCTCTTCTACATCATCATGCAATGCCTGGGTGC

upper sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: PP1S305_12V6.1 (Physcomitrella patens), 3'ss of exon 1
--------ctcataagcctccacacaatt-ttctagagaga-gttttctgcaacatcttgattt--gaatctgtgttgatattatca-----ataatttgttgatgggtttg-------------------ggc---agGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC
          |      |    ||||| | ||  |||  || | | | |     |||||| |||    ||||  || ||| ||          |  | || ||||| | |||                   |||   ||| ||||||||||||||||| |||||||| |||||  ||||||| |||||| || |  |  | ||  | || || |||||  |    |||||| |||| ||
gtaaagaatgcgctgctcatttcacaagtattgcagaatgatgatgtttatgtgatcttggtttccagatcttcgtagatttttatgtgagggtggtctgatgatgagcttgcccggggtttgatgatgatggcttaagGTGGACACATAAACCCAGCTGTGACATTCGGCCTCTTCTTGGCAAGAAAGGTGACATTCCCACGTACAGTATTGTACATTGTGTGTCAATGCTTGGGTGC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161721460|gb|FC070451.1|FC070451
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|351052613|gb|FQ456461.1|FQ456461
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71863402|gb|DT012457.1|DT012457
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|30254170|gb|CB971185.1|CB971185
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71856846|gb|DT005901.1|DT005901
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71875732|gb|DT024787.1|DT024787
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110732584|gb|EE107998.1|EE107998
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|33405265|gb|CF210892.1|CF210892
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71868989|gb|DT018044.1|DT018044
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110718142|gb|EE094639.1|EE094639
EST:     TTTTGGGGGTATGGTCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|349832881|gb|FQ423003.1|FQ423003
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110729242|gb|EE105363.1|EE105363
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77580862|gb|DV219356.1|DV219356
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|351047800|gb|FQ459020.1|FQ459020
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|351048532|gb|FQ448806.1|FQ448806
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|161712077|gb|FC061449.1|FC061449
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77585745|gb|DV221967.1|DV221967
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110725353|gb|EE101754.1|EE101754
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110689647|gb|EE066053.1|EE066053
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110720562|gb|EE096595.1|EE096595
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|30252078|gb|CB968717.1|CB968717
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|349833027|gb|FQ416405.1|FQ416405
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77582294|gb|DV220111.1|DV220111
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77580281|gb|DV219033.1|DV219033
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|34548496|gb|CF516728.1|CF516728
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71861859|gb|DT010914.1|DT010914
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71866487|gb|DT015542.1|DT015542
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110688607|gb|EE067351.1|EE067351
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71876381|gb|DT025436.1|DT025436
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|161705695|gb|FC055794.1|FC055794
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTG
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTG
EST: gi|161717181|gb|FC069568.1|FC069568
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|161715179|gb|FC064857.1|FC064857
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77581745|gb|DV219825.1|DV219825
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|33409808|gb|CF215435.1|CF215435
EST:     TTTTGGGGGTACGATCTTTGCCCTTGTCTACTGCACTGCTGATATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|46918024|gb|CN547353.1|CN547353
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77588346|gb|DV223388.1|DV223388
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|87584813|gb|DY473830.1|DY473830
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|30303550|gb|CB980344.1|CB980344
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77582738|gb|DV220357.1|DV220357
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110705808|gb|EE083078.1|EE083078
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77588739|gb|DV223588.1|DV223588
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110695883|gb|EE074412.1|EE074412
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|351035224|gb|FQ458581.1|FQ458581
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71870600|gb|DT019655.1|DT019655
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|161720968|gb|FC070348.1|FC070348
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77577505|gb|DV217495.1|DV217495
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110726334|gb|EE102026.1|EE102026
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110698200|gb|EE075479.1|EE075479
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77580366|gb|DV219069.1|DV219069
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|33402029|gb|CF207656.1|CF207656
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|37187959|gb|CF607310.1|CF607310
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|349816514|gb|FQ399503.1|FQ399503
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|33401613|gb|CF207240.1|CF207240
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110707985|gb|EE085010.1|EE085010
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110696604|gb|EE072864.1|EE072864
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71868082|gb|DT017137.1|DT017137
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110710650|gb|EE086969.1|EE086969
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110719251|gb|EE097012.1|EE097012
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|18458025|gb|BM436303.1|BM436303
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110687136|gb|EE064282.1|EE064282
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110698629|gb|EE076343.1|EE076343
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|30296924|gb|CB973718.1|CB973718
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|351014036|gb|FQ434188.1|FQ434188
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|161718856|gb|FC066657.1|FC066657
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|71861951|gb|DT011006.1|DT011006
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|351018710|gb|FQ425612.1|FQ425612
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|18458997|gb|BM437275.1|BM437275
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|37188416|gb|CF607765.1|CF607765
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|33405253|gb|CF210880.1|CF210880
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110688484|gb|EE067092.1|EE067092
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|87585869|gb|DY474409.1|DY474409
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110702789|gb|EE079065.1|EE079065
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110357108|gb|EC920423.1|EC920423
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110692133|gb|EE071027.1|EE071027
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|294964103|gb|GW837906.1|GW837906
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|34544388|gb|CF512620.1|CF512620
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|110696079|gb|EE074832.1|EE074832
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|34546377|gb|CF514609.1|CF514609
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
EST: gi|77581628|gb|DV219762.1|DV219762
EST:     TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAG                         GAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC
genomic: TTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGgtctgttctc ... gtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcttgatttgaatctgtgttgatattatcaataatttgttgatgggtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC
                                    tgttgat  putative branch site (score: 4)
                  ttgatattatcaataa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ctcataagcctccacacaattttctagagagagttttctgcaacatcttgatttgaatctgtgttgatattatcaataatttgttgatgggtttgggcagGAGGACACATAAACCCAGCGGTGACATTTGGCCTGCTCTTGGCCAGAAAGCTGTCTCTAACCCGAGCCGTGTTCTACATGATCATGCAATGCCTGGGCGC

- - - - - -ccacaca
- - - - - - - - - - - - -agagaga
- - - - - - - - - - - - - - - - - - - - caacatc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgatgg