Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgaatttccttatccttaatattgaaatagatcacctaggaaattatagattttcaaactcctgttcttaaataataataataataataaaatctattgtctattttttgtttctttcctttctattttcttcttatgatcttacctaggatttttattattattattattattttgcatggcaaataagTTGCAGCATTTTTATACCATAGAGTTATAA

Basic information

species Vitis vinifera
transcript Vv15s0046g00640.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atgatcttacctaggatttttattattattattattattttgcatggcaaataagTTGCAGCATTTTTATACCATAGAGTTATAA
   atcttac  putative branch site (score: 3)
               atttttattattatta  TA-rich tract