Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttctcagtaaggaaatggactccagtctctcttaattattggagcataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT

Basic information

species Vitis vinifera
transcript Vv14s0066g00140.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv14s0066g00140.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: LOC_Os09g39180.1 (Oryza sativa), 3'ss of exon 1
ttctcagtaaggaaatggactccagtctctc---ttaattattggagcataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgt--agGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT
   | | || |  ||  |  |  || |  |      || |||| |   ||    | |||| |||   ||| |       |||    ||| |||     |||  |||| || ||||| ||||||||||||| ||||||||| ||||| ||| | || |||||||| ||||| ||||| || |||||||||||||||||| | || |
--tttattatgtgaaccgtatagaggcagttagacaaaatattaggatatgcatggttttgttc---ttttgatcagaaatgaacctctattttcgcgtgttcagGTCATCTACAACAGAGAAACAGATCGGAGTCGTGGATTTGGATTTGTCACCATGAGCACCGTTGAGGAGGCTGAGAAGGCTGTGGAGATGTTCCATCGCT

upper sequence: Vv14s0066g00140.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G011129_T01 (Zea mays), 3'ss of exon 1
----------ttctcagtaaggaaatggactccagtctctcttaattattggagcataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT
          |  |      | | |||   ||  ||  | | |     ||| |  | ||| | ||       ||||||   ||||||  |     | | ||  |  | |||| |||||||| |||||||||||||| |||||||||||||||||| | || ||||||||||| || ||||| || |||||||||||||||||| | || |
cattgtttgatcttttaggggtatatgttttcgtgttccccctgg--gttgaaaaaaaggagcttgct----catttg---ttctgaaatggactt-tgtcactgcgcagGTCATTTACAACAGAGAAACAGATCAAAGTCGTGGGTTTGGGTTTGTCACTATGAGCACTGTCGAGGAGGCTGAGAAGGCTGTGGAGATGTTCCATCGCT

upper sequence: Vv14s0066g00140.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA06G18470.1 (Glycine max), 3'ss of exon 1
-------------------------------ttctcagtaaggaaatggactccagtctctcttaattattggagcataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT
                               |||||       || | || |  |   |    | ||| |    |  | |   | ||     |    || |||   | | ||| | | ||| |  || ||||| ||||| || || ||||| || |||||||| |||||||||||| | || ||||| ||||||||||| || ||||  ||||||||||  |||||||| |
gtcagaaacaaagagagagaggctctttaccttctcgtgtttcaatttgaatttatgttaatgttattgtgttggggttgaaaacttgaaatgagcgtgcggtgtggttctttctttttttgttattttagGTTATTTATAACAGGGAAACTGACCAGAGTCGCGGGTTTGGGTTTGTGACGATGAGTACTGTTGAAGAAGCTGAAAGCGCTGTGGAGAAATTCAACCGCT

upper sequence: Vv14s0066g00140.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AT4G24770.1 (Arabidopsis thaliana), 3'ss of exon 1
-ttctcagtaaggaaatggactccagtctctcttaattattggagcataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgta-gGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT
 |      | |    ||    |    ||||||||  |||||  ||   | | |||  | ||   | |   |  | || | |||   |  || |  ||||| ||| || |||||||| ||||| || ||||||||||||||||| ||| | ||||||||  |||| || || || || |  |||||||||| ||||||||| |
atatctgttgacattatacttttggttctctcttttttattt-agttcaagagataatgttgttagtcctgact-tgttctttgaattcttgtggttgtaagGTTATATACAATAGGGAAACTGACCAGAGTCGTGGGTTTGGATTTGTGACAATGAGTTCTGTGGACGAAGCTGAGACAGCTGTGGAGAAGTTCAACCGTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161720695|gb|FC070627.1|FC070627
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAAAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349824807|gb|FQ414665.1|FQ414665
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349811920|gb|FQ410717.1|FQ410717
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349822818|gb|FQ398205.1|FQ398205
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGGTCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351037444|gb|FQ460643.1|FQ460643
EST:     AGAAATTGGCTCAGCTCTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GCAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349824935|gb|FQ406507.1|FQ406507
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349818406|gb|FQ409181.1|FQ409181
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTGCAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351047670|gb|FQ455067.1|FQ455067
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGAGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349815227|gb|FQ400382.1|FQ400382
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351048051|gb|FQ441223.1|FQ441223
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351025779|gb|FQ426793.1|FQ426793
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351038582|gb|FQ464448.1|FQ464448
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCACAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|352790710|gb|FQ478258.1|FQ478258
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351055795|gb|FQ452260.1|FQ452260
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351032746|gb|FQ462460.1|FQ462460
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|110388325|gb|EC953061.1|EC953061
EST:     GGAGTTGTGGAGATTGCAGAG                         GTATTTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: GGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351046687|gb|FQ453303.1|FQ453303
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|110692562|gb|EE071952.1|EE071952
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351040362|gb|FQ434495.1|FQ434495
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349827983|gb|FQ422851.1|FQ422851
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351037330|gb|FQ460529.1|FQ460529
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAT                         GTAATTTACAATAGATAAACAGATCAGACTCGAGGGT
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGT
EST: gi|349827062|gb|FQ421335.1|FQ421335
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351028984|gb|FQ434985.1|FQ434985
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349811845|gb|FQ410642.1|FQ410642
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351030761|gb|FQ438599.1|FQ438599
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349820983|gb|FQ408691.1|FQ408691
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|352794524|gb|FQ481757.1|FQ481757
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351037988|gb|FQ460730.1|FQ460730
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351046638|gb|FQ453254.1|FQ453254
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351031588|gb|FQ459845.1|FQ459845
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351053407|gb|FQ455743.1|FQ455743
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351041692|gb|FQ455902.1|FQ455902
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351037519|gb|FQ460718.1|FQ460718
EST:     GGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351042834|gb|FQ451128.1|FQ451128
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|352795736|gb|FQ480324.1|FQ480324
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351055320|gb|FQ441918.1|FQ441918
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351020373|gb|FQ445980.1|FQ445980
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|30252338|gb|CB969889.1|CB969889
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGGGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351041686|gb|FQ455896.1|FQ455896
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351038190|gb|FQ460882.1|FQ460882
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAAAG                         GTAATTTACAATATAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351023041|gb|FQ430916.1|FQ430916
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCACAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351054963|gb|FQ440302.1|FQ440302
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351023050|gb|FQ430925.1|FQ430925
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351032610|gb|FQ462324.1|FQ462324
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349817859|gb|FQ407848.1|FQ407848
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351056317|gb|FQ454178.1|FQ454178
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349826258|gb|FQ416063.1|FQ416063
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351036955|gb|FQ459477.1|FQ459477
EST:     AGAAATTGGCTCAGCTTTTTGACAAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349811485|gb|FQ409481.1|FQ409481
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATTAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351036772|gb|FQ457485.1|FQ457485
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349826808|gb|FQ418899.1|FQ418899
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351047763|gb|FQ458983.1|FQ458983
EST:     AGAAATTGGCCCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351052670|gb|FQ453778.1|FQ453778
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351045070|gb|FQ449324.1|FQ449324
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGTGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351033910|gb|FQ462965.1|FQ462965
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTGCAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351038577|gb|FQ464443.1|FQ464443
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351018578|gb|FQ424685.1|FQ424685
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|352786054|gb|FQ481849.1|FQ481849
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349819887|gb|FQ404609.1|FQ404609
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351036071|gb|FQ463916.1|FQ463916
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351041578|gb|FQ455794.1|FQ455794
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGTAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349825594|gb|FQ421693.1|FQ421693
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351035562|gb|FQ463407.1|FQ463407
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|30252251|gb|CB969802.1|CB969802
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGGGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351033258|gb|FQ462030.1|FQ462030
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGACAAACAGATCACAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349813741|gb|FQ413975.1|FQ413975
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCATAG                         GTAATTTACAATAGAGAAACACATCAGAGTCATGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351032328|gb|FQ461581.1|FQ461581
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCACAG                         GTAATTTACAATAGAGAAACAGATCACAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351051941|gb|FQ450632.1|FQ450632
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351024661|gb|FQ433076.1|FQ433076
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351016894|gb|FQ424321.1|FQ424321
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351035054|gb|FQ458411.1|FQ458411
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351041777|gb|FQ455987.1|FQ455987
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351052719|gb|FQ453827.1|FQ453827
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351021865|gb|FQ437252.1|FQ437252
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349807401|gb|FQ401393.1|FQ401393
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351033215|gb|FQ461987.1|FQ461987
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349828422|gb|FQ417164.1|FQ417164
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349820125|gb|FQ404847.1|FQ404847
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGGTCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351042748|gb|FQ431225.1|FQ431225
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349820279|gb|FQ403895.1|FQ403895
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349816892|gb|FQ405018.1|FQ405018
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351033857|gb|FQ447895.1|FQ447895
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351015115|gb|FQ444404.1|FQ444404
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|110380288|gb|EC945540.1|EC945540
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351046028|gb|FQ441411.1|FQ441411
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349809879|gb|FQ398504.1|FQ398504
EST:     GGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349819511|gb|FQ413395.1|FQ413395
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351054852|gb|FQ462882.1|FQ462882
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|351029389|gb|FQ436783.1|FQ436783
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGACAAACAGATCAGAGTCGTGGGTTTGGGTTT-TAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349811167|gb|FQ406155.1|FQ406155
EST:     AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCGGAG                         GTAATTTACAATAGAGAAACAGATCACAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
EST: gi|349823323|gb|FQ402522.1|FQ402522
EST:     AGAAATTGGCTCAGCTCTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAG                         GTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA
genomic: AGAAATTGGCTCAGCTTTTTGACGAGGCTGGAGTTGTGGAGATTGCAGAGgtaaaatttt ... ctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT
                          ttctgat  putative branch site (score: 3)
                                  tttttctgtttctatt  CT-rich tract
                                          tttctattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ttctcagtaaggaaatggactccagtctctcttaattattggagcataggggattttcttcgcatttggggttctgatgtttttctgtttctatttgtagGTAATTTACAATAGAGAAACAGATCAGAGTCGTGGGTTTGGGTTTATAACAATGAGCACTGTTGAAGAGGCCGAAAAGGCTGTGGAGATGTTCAACCGAT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - aaggaaa
- - - - - - - - -gactcca
- - - - - - - - - - - - -tctctct
- - - - - - - - - - - - - - - - - - - - -gagcata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctgatgt