Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacatccatattcacattctctgaagctatatacatatatatggcgtagcctatgagcttacgcttgtttttggggtgttttccagGAGCTGCCGGTTCATCAGAGAGCAGATGCAGTGAGCAGTCTAGTATACGAGGCGAATGCGAGAGTTAGAGACCCGGTTTACGGGTGTGTCGGAGCCATAT

Basic information

species Vitis vinifera
transcript Vv13s0067g01880.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tacatatatatggcgtagcctatgagcttacgcttgtttttggggtgttttccagGAGCTGCCGGTTCATCAGAGAGCAGATGCAGTGAGCAGTCTAGTATACGAGGCGAATGCGAGAGTTAGAGACCCGGTTTACGGGTGTGTCGGAGCCATAT
                        agcttac  putative branch site (score: 3)
 tgttttcc  putative PPT
 ttgttttt  TA-rich tract