1 5' 3' | 2 5' 3' | 3 5' 3' |
...cagttttacggttctttagctgtctatgcgctttcttttttttgtttaatataacaatgcttacttgaatttttttcatttttgtactacttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAAAG
species | Vitis vinifera |
transcript | Vv13s0019g00250.t01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110424953|gb|EC991328.1|EC991328
genomic: CCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: ATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351026570|gb|FQ432468.1|FQ432468
genomic: ATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110385983|gb|EC950550.1|EC950550
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|33407650|gb|CF213277.1|CF213277
genomic: CCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAACGGCTCCTGCTAEST: gi|32268037|gb|CD717196.1|CD717196
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110401007|gb|EC967598.1|EC967598
genomic: GCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|87584424|gb|DY473607.1|DY473607
genomic: GCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351024094|gb|FQ423517.1|FQ423517
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351019485|gb|FQ429620.1|FQ429620
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351015356|gb|FQ445640.1|FQ445640
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTCCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|71874223|gb|DT023278.1|DT023278
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351022551|gb|FQ447073.1|FQ447073
genomic: CCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|71866219|gb|DT015274.1|DT015274
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: AACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|352798732|gb|FQ478367.1|FQ478367
genomic: AACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|77585769|gb|DV221981.1|DV221981
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110358012|gb|EC921923.1|EC921923
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: TTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351031276|gb|FQ445301.1|FQ445301
genomic: TTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTTGCATCCTGCAATGGCTCCTGCTEST: gi|37188705|gb|CF608054.1|CF608054
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAG-TTTTTGCATCCTGCAATGGCTCCTGCT
EST: CTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|352794786|gb|FQ475281.1|FQ475281
genomic: CTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110397454|gb|EC963194.1|EC963194
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: AGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110705535|gb|EE082493.1|EE082493
genomic: AGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351022935|gb|FQ428844.1|FQ428844
genomic: CTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351017294|gb|FQ435646.1|FQ435646
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351041471|gb|FQ431497.1|FQ431497
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351025316|gb|FQ434329.1|FQ434329
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|34546152|gb|CF514384.1|CF514384
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTCTATGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351034464|gb|FQ463277.1|FQ463277
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351040253|gb|FQ425339.1|FQ425339
genomic: GCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110427033|gb|EC993464.1|EC993464
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|77581490|gb|DV219684.1|DV219684
genomic: CCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|33407736|gb|CF213363.1|CF213363
genomic: CCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAACGGCTCCTGCTAEST: gi|351040059|gb|FQ425145.1|FQ425145
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110691014|gb|EE068628.1|EE068628
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110378352|gb|EC943479.1|EC943479
genomic: CTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|37188762|gb|CF608111.1|CF608111
genomic: GCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: TTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351049057|gb|FQ431601.1|FQ431601
genomic: TTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351040964|gb|FQ443740.1|FQ443740
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTTCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351015928|gb|FQ431883.1|FQ431883
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGTTCCTGCTAEST: gi|351025380|gb|FQ435072.1|FQ435072
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110732209|gb|EE107294.1|EE107294
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: AACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|37187755|gb|CF607108.1|CF607108
genomic: AACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|33409901|gb|CF215528.1|CF215528
genomic: CATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGGATCNTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|77581308|gb|DV219585.1|DV219585
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110398202|gb|EC964392.1|EC964392
genomic: CCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110689642|gb|EE066055.1|EE066055
genomic: CCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110693455|gb|EE069699.1|EE069699
genomic: CCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|30135975|gb|CB921313.1|CB921313
genomic: CCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|349826876|gb|FQ418967.1|FQ418967
genomic: CAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351029071|gb|FQ435271.1|FQ435271
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|349831052|gb|FQ420722.1|FQ420722
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110731174|gb|EE109098.1|EE109098
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110405089|gb|EC970622.1|EC970622
genomic: CATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: TCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|349828347|gb|FQ416300.1|FQ416300
genomic: TCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCTCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCGATGGCTCCTGCTAEST: gi|110701169|gb|EE078463.1|EE078463
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351045311|gb|FQ451759.1|FQ451759
genomic: CGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110703496|gb|EE080395.1|EE080395
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CTTCCTCTCTCCCA- GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351030992|gb|FQ439028.1|FQ439028
genomic: CTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|352787182|gb|FQ477802.1|FQ477802
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110394508|gb|EC959611.1|EC959611
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110361115|gb|EC924568.1|EC924568
genomic: CCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110702091|gb|EE080407.1|EE080407
genomic: CTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|351014099|gb|FQ434251.1|FQ434251
genomic: CATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110397173|gb|EC962897.1|EC962897
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110363300|gb|EC926877.1|EC926877
genomic: CCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|110702263|gb|EE080779.1|EE080779
genomic: CCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: CTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAEST: gi|349830993|gb|FQ418277.1|FQ418277
genomic: CTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
EST: GCAGCCGCATCAACCCTTCCTCTCTCCCAG GTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
genomic: GCAGCCGCATCAACCCTTCCTCTCTCCCAGgtacgtttcc ... ttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTA
ttaatataacaatgcttacttgaatttttttcatttttgtactacttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAAAG
tgcttac putative branch site (score: 2)
tttttttcatttttgt putative PPT
aatttttttcattttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cagttttacggttctttagctgtctatgcgctttcttttttttgtttaatataacaatgcttacttgaatttttttcatttttgtactacttttttccagGTTTGGAAGTGCTTTAAGCAGAGTTTTTGCATCCTGCAATGGCTCCTGCTAAAG
- - - - - - - - - - - - tatgcgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - caatgct