Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|34319329|gb|CF372083.1|CF372083EST: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATG GCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
genomic: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATGgtatttcctc ... ggatttgcagGCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
EST:
gi|71873850|gb|DT022905.1|DT022905EST: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATG GCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
genomic: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATGgtatttcctc ... ggatttgcagGCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
EST:
gi|77584555|gb|DV221355.1|DV221355EST: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATG GCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
genomic: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATGgtatttcctc ... ggatttgcagGCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
EST:
gi|110379612|gb|EC944821.1|EC944821EST: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATG GCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
genomic: GGTTCCCCACCACCTGCTTGATCTACGGAGCCTCTGTTCTCGGTTCCATGgtatttcctc ... ggatttgcagGCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
gtatttcctcttcctatcttaattttatttatttattattatttctcgtaggtttttgatttcggatatcttaacaaaatcttatatcttgtgtttttgtttggaaaatgaatgttttcaaaaaattggtttttaaaaaagcaattttcgaaacaaattcttcatgattttggagttgaagtggaggtttggatttgcagGCAGCTATAATAGGAGAATTGGTGACATCGGGCAGGGCATCGGAAACGCTGCTGATGGTGTACTACCCTTTCTTGGGGCTTGCTGTCTTGGCCATTTTAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT