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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gggagcaagttctaagaatttggactaaaaatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG

Basic information

species Vitis vinifera
transcript Vv12s0059g01310.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: LOC_Os01g68950.1 (Oryza sativa), 3'ss of exon 1
----gggagcaagttct--aagaatttggactaaaaatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
            ||| |  |  | | | || | | ||  | | ||     |||| |     |||  ||  | |   |   |  || |  | |||| |     | |||||||||| || || |||||| | ||||| |||   || |||||||||||||| ||||| || ||||||||||| || ||||| ||  | ||  | ||||
catgatattttggttatgcagcactctcgaatgagaaattatttgacaatagtt-gtgtttttttgtgctcgattcgttaacaatttcctttgttct-----gtagGATGGGAACGAGGTATTCTTCCGCATCAAGAGATCTACGCAGCTGAAGAAGCTGATGAACGCCTATTGTGACCGTCAGTCTGTGGATATGAATGCTATTG

upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G082390_T02 (Zea mays), 3'ss of exon 1
---gggagcaagttctaagaatt-tggactaaaaatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
        ||  ||  ||   ||    |||    ||||| |  | |  ||| |  |  ||  | || ||    |  |     | |  |     || |||   ||||||| ||||| || |||||  | || || ||   ||| |||||||||||||| ||||| |||||||||||||| || ||||| ||| | ||  | ||||
ttacatgtcatattgaaaaggttacacacttttgatatcgcaatctcaagtgttatctgtcacttg-actcttttccatctttataataataattgtat---agGATGGCAATGAGGTGTTCTTTCGCATAAAGAGGTCCACCCAGCTGAAGAAGCTGATGAACGCTTATTGTGACCGCCAGTCTGTGGACATGAATGCCATTG

upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA08G46500.2 (Glycine max), 3'ss of exon 1
gggagcaagttctaagaatttggactaaa--aatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgt-gttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
     | |  | |||       || ||    |  || |   |||    | ||   |  || ||  ||||  |    |   | | || ||    |||  || ||||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||||| || ||||| || |||||||||||  | ||||| ||||
---tactatctttaacccaactgattatctcacaatataaatttattttatgggggaatttctttacaaatttttcatctttttgtggttgacttttgtgtagGATGGTAATGAGGTTTTCTTTAGGATTAAAAGAAGCACTCAGCTCAAGAAACTTATGAATGCATACTGTGATCGTCAATCTGTAGATTTTAACTCAATTG

upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA18G35450.1 (Glycine max), 3'ss of exon 1
-gggagcaagttctaagaatttggactaaaaatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgt-gttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
        |   | |   | ||   || | |||||     |||    ||||   |  || ||  ||||  |  | |   | | || ||    ||| ||| ||||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| || || ||||| || |||||||||||  | ||||| ||||
actatcttaacccaactgactttatctcacaatataa--atttattttttgggggaatttctttacaaattttccatctttttgtggttgacttttttgtagGATGGCAATGAGGTTTTCTTTAGGATTAAAAGAAGCACTCAGCTCAAGAAACTGATGAACGCATACTGTGATCGTCAATCTGTAGATTTTAACTCAATTG

upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AT4G26840.1 (Arabidopsis thaliana), 3'ss of exon 1
gggagcaagttctaagaatttggactaaaaatatctctgtt-tgcagtt--tgctaggtttcctggacaagatgacgaggatgtgttgtgt---tttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
      |   | | ||  |     | ||| | | |  |||  |  ||||  || |   | | | |      | |   |   |   || | |   ||| | ||  ||||||| || || |||||||| |||||||| |||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| ||| | ||||| ||||
------actctttcaggttactaccaaaagagagccatgtgatttagttattgtttcatatgcggtctctaacgtttattgttccttctatatgtttgttttatagGATGGAAACGAGGTTTTCTTTAGGATCAAGAGAAGCACTCAGCTCAAGAAGCTGATGAATGCTTACTGTGACCGGCAATCTGTGGACATGAACTCCATTG

upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AT5G55160.1 (Arabidopsis thaliana), 3'ss of exon 1
gggagcaagttctaag--aatttggactaaaaatatctctgtttgcagtttgcta---ggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
    |   || ||  |    ||     || |  | |   | ||   |   |  ||     |   ||     |  | || |  ||  ||  | ||| || | | ||||||| |||||||| ||||| |||||||| |||||||| ||||| || || || ||||||||||| |||||||| || ||||| ||  ||||||| ||||
----gttggtacttggttggttatagatacagtttttggtattgagaaaatcgtatataatactcttcttgaagtaacaatcattggtaatttttcttgt-gtagGATGGTAATGAAGTCTTCTTTAGGATCAAGAGAAGCACTCAGCTCAAAAAACTGATGAATGCTTACTGTGACCGTCAGTCTGTGGATTTCAACTCAATTG

upper sequence: Vv12s0059g01310.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AT5G55160.2 (Arabidopsis thaliana), 3'ss of exon 2
gggagcaagttctaagaatttgg-actaaaaatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
               |  ||||| | | | || |||   || |  | |   ||     || || |     | || |  ||  ||  | ||| || | | ||||||| |||||||| ||||| |||||||| |||||||| ||||| || || || ||||||||||| |||||||| || ||||| ||  ||||||| ||||
---------------gtttttggtattgagaaaatc---gtatataatactct-----tcttgaa----gtaacaatcattggtaatttttcttgt-gtagGATGGTAATGAAGTCTTCTTTAGGATCAAGAGAAGCACTCAGCTCAAAAAACTGATGAATGCTTACTGTGACCGTCAGTCTGTGGATTTCAACTCAATTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110422398|gb|EC988720.1|EC988720
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26264021|gb|CA815084.1|CA815084
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|28964903|gb|CB343936.1|CB343936
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26257479|gb|CA808542.1|CA808542
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110410798|gb|EC976490.1|EC976490
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|32459133|gb|CD800307.1|CD800307
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30136004|gb|CB921342.1|CB921342
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|46917799|gb|CN547128.1|CN547128
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30127414|gb|CB912753.1|CB912753
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30125917|gb|CB911256.1|CB911256
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|37189347|gb|CF608696.1|CF608696
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30132714|gb|CB918053.1|CB918053
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30126344|gb|CB911683.1|CB911683
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110410235|gb|EC975913.1|EC975913
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30131126|gb|CB916465.1|CB916465
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110379846|gb|EC945067.1|EC945067
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|28964853|gb|CB343886.1|CB343886
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110392708|gb|EC956978.1|EC956978
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|33409754|gb|CF215381.1|CF215381
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110426450|gb|EC992861.1|EC992861
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110407826|gb|EC973443.1|EC973443
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|34543661|gb|CF511893.1|CF511893
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|32459158|gb|CD800332.1|CD800332
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26265621|gb|CA816684.1|CA816684
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110395721|gb|EC961391.1|EC961391
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110409637|gb|EC975304.1|EC975304
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26267674|gb|CA818737.1|CA818737
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110390691|gb|EC955615.1|EC955615
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110400951|gb|EC967540.1|EC967540
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110399286|gb|EC965785.1|EC965785
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30296103|gb|CB972897.1|CB972897
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|32458277|gb|CD799451.1|CD799451
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110691968|gb|EE070678.1|EE070678
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110374086|gb|EC938612.1|EC938612
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110414455|gb|EC980287.1|EC980287
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110426606|gb|EC993020.1|EC993020
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|111125098|gb|EE253716.1|EE253716
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAGGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26259585|gb|CA810648.1|CA810648
EST:     AGAAGCCCAACGACCAATCGGGTCACATCGATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110410312|gb|EC975992.1|EC975992
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30133061|gb|CB918400.1|CB918400
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110385810|gb|EC950366.1|EC950366
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30133372|gb|CB918711.1|CB918711
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30132344|gb|CB917683.1|CB917683
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26256880|gb|CA807943.1|CA807943
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110724057|gb|EE099552.1|EE099552
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110410860|gb|EC976554.1|EC976554
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|352795428|gb|FQ476543.1|FQ476543
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30305920|gb|CB982714.1|CB982714
EST:     CCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: CCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30303436|gb|CB980230.1|CB980230
EST:     AGAAGCCCAACGCCCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCCCCCAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30136393|gb|CB921731.1|CB921731
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|28961375|gb|CB340697.1|CB340697
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30137366|gb|CB922704.1|CB922704
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|71879837|gb|DT028892.1|DT028892
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110371775|gb|EC935898.1|EC935898
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26261681|gb|CA812744.1|CA812744
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110407055|gb|EC972647.1|EC972647
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110394862|gb|EC960237.1|EC960237
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110400390|gb|EC966951.1|EC966951
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|34319128|gb|CF371882.1|CF371882
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGTTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110381871|gb|EC935611.1|EC935611
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110405760|gb|EC971308.1|EC971308
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110407651|gb|EC973260.1|EC973260
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110401816|gb|EC968437.1|EC968437
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30136028|gb|CB921366.1|CB921366
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30136704|gb|CB922042.1|CB922042
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30131607|gb|CB916946.1|CB916946
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110402093|gb|EC968726.1|EC968726
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110411462|gb|EC977176.1|EC977176
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30131458|gb|CB916797.1|CB916797
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|18459193|gb|BM437471.1|BM437471
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|32458358|gb|CD799532.1|CD799532
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110401426|gb|EC968036.1|EC968036
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30303366|gb|CB980160.1|CB980160
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|71869865|gb|DT018920.1|DT018920
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110386696|gb|EC951312.1|EC951312
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|28959579|gb|CB339790.1|CB339790
EST:     AGAAGCCCAACGACCAATCGGGTCACTTCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110411432|gb|EC977145.1|EC977145
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|71873669|gb|DT022724.1|DT022724
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|77588944|gb|DV223722.1|DV223722
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110398585|gb|EC965050.1|EC965050
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26265232|gb|CA816295.1|CA816295
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110699510|gb|EE076572.1|EE076572
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110402667|gb|EC960713.1|EC960713
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|32456505|gb|CD797679.1|CD797679
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACCCAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110406344|gb|EC971914.1|EC971914
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|30132121|gb|CB917460.1|CB917460
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110418485|gb|EC984643.1|EC984643
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|26267455|gb|CA818518.1|CA818518
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|33409547|gb|CF215174.1|CF215174
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|18459137|gb|BM437415.1|BM437415
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|110714749|gb|EE092014.1|EE092014
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
EST: gi|33409303|gb|CF214930.1|CF214930
EST:     AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAG                         GATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG
genomic: AGAAGCCCAACGACCAATCGGGTCACATCAATCTCAAGGTCAAGGGTCAGgtacgttctt ... tttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtttgctaggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG
                                          ttttttatt  CT-rich tract
                                     ttgtgttttttatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gggagcaagttctaagaatttggactaaaaatatctctgtttgcagtttgctaggtttcctggacaagatgacgaggatgtgttgtgttttttattgcagGATGGGAATGAAGTTTTCTTCAGGATCAAAAGAAGCACACAGCTGAAGAAGCTCATGAATGCTTATTGTGACCGACAATCTGTAGACCTCAACTCGATTG

- - - - - - - - - - - - - aaaaata
- - - - - - - - - - - - - - - - - - -tgtttgc
- - - - - - - - - - - - - - - - - - - - - - - -ttgctag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gacaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggatgtg