Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110362974|gb|EC926539.1|EC926539EST: TCTTGTTTACTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAG AGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
genomic: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAGgtgattttat ... tgtattacagAGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
EST:
gi|71876805|gb|DT025860.1|DT025860EST: TCTTGTTTACTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAG AGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
genomic: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAGgtgattttat ... tgtattacagAGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
EST:
gi|37185968|gb|CF605321.1|CF605321EST: TCTTGTTTACTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAG AGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
genomic: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAGgtgattttat ... tgtattacagAGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
EST:
gi|254916348|gb|GR904206.1|GR904206EST: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAG AGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
genomic: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAGgtgattttat ... tgtattacagAGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
EST:
gi|110702896|gb|EE079270.1|EE079270EST: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAG AGAAAAGCACAGAAGGCAAGGGTGTTCAAGAGAGCAAGTCCTATGGAGGCC
genomic: TCTTGTTTGCTTGATCTCATCTGAAGTATCTGCTTCCGTTCATGAAACAGgtgattttat ... tgtattacagAGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tgcttttgatagttcgcattatatgacatatattaattttctgtttgtattacagAGAAAAGCACAGAAGGCAAGGGTGTTCAGGAGAGCAAGTCCTATGGAGGCCCCGGAAACGGGTATCAGGGTGGGTATGGAGGAGGGCATCAAGGTGGTTA
tattaat putative branch site (score: 2)
ttttctgttt CT-rich tract
attatatgacatatat TA-rich tract