Sequence
atgc intronic sequence ATGC exonic sequence...ggcggctccaacctttttcccaaaaattaatttttcacaaataaaaagcgagtctcgccgatcgagtggggacgcacgtgaaaaatgcgggtccacaaagAGAAGAAGAAAACTTATGCTCCTTTAATGGAACTTACAACCAAATCTATGAAGAAACGAAGAAAACAAATTATCCCATTTAATCACCACAAACAATAATA
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.aagcgagtctcgccgatcgagtggggacgcacgtgaaaaatgcgggtccacaaagAGAAGAAGAAAACTTATGCTCCTTTAATGGAACTTACAACCAAATCTATGAAGAAACGAAGAAAACAAATTATCCCATTTAATCACCACAAACAATAATA
tgaaaaat TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ggcggctccaacctttttcccaaaaattaatttttcacaaataaaaagcgagtctcgccgatcgagtggggacgcacgtgaaaaatgcgggtccacaaagAGAAGAAGAAAACTTATGCTCCTTTAATGGAACTTACAACCAAATCTATGAAGAAACGAAGAAAACAAATTATCCCATTTAATCACCACAAACAATAATA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - -ctccaac
- - - - - - - - ttcccaa
- - - - - - - - - - - -aaattaa
- - - - - - - - - - - - - - - - - - - aaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggacgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgaaaaa