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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggtagtttggttgattgtagataaagtggtttgggattttgcaattgctagttttggatttataatgagacatttttgctatatttagaatgcagtttttttgtgagaaggggcatgctaaatccacccccacccccattaaccttgtgctaaaatattgaagggatgcaagAGGATTACTACTACTCCCATTCCCTCATACAAGATGTGCTTTGGGGTGGGCTTTATCACTTTGGTGAGTCAATTCTCAAACATTGGCCCTTCTCCAAAAT

Basic information

species Vitis vinifera
transcript Vv10s0003g03620.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctaaatccacccccacccccattaaccttgtgctaaaatattgaagggatgcaagAGGATTACTACTACTCCCATTCCCTCATACAAGATGTGCTTTGGGGTGGGCTTTATCACTTTGGTGAGTCAATTCTCAAACATTGGCCCTTCTCCAAAAT
                              tgctaaa  putative branch site (score: 2)
                                 taaaatattgaa  TA-rich tract