Sequence
atgc intronic sequence ATGC exonic sequence...catgaagacctcattaatggtgagtaatagctggctgtaagtttggagtcaaagacatgtcaaggagatgattagttacatgtcttattctcttttgtagGTTTCTGCCAATTGAATAAGCTTCAAGAGTTAGATCTTTCTTACAACTTATTCCAAGGGATCCTTCCTCCATGTTTGAATAATTTCACATCTCTGAGGTT
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gagtcaaagacatgtcaaggagatgattagttacatgtcttattctcttttgtagGTTTCTGCCAATTGAATAAGCTTCAAGAGTTAGATCTTTCTTACAACTTATTCCAAGGGATCCTTCCTCCATGTTTGAATAATTTCACATCTCTGAGGTT
tgtcttattctctttt CT-rich tract
attagtta TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
catgaagacctcattaatggtgagtaatagctggctgtaagtttggagtcaaagacatgtcaaggagatgattagttacatgtcttattctcttttgtagGTTTCTGCCAATTGAATAAGCTTCAAGAGTTAGATCTTTCTTACAACTTATTCCAAGGGATCCTTCCTCCATGTTTGAATAATTTCACATCTCTGAGGTT
catgaag
- - - -acctcat
- - - - - - - - -tggtgag
- - - - - - - - - - - - - - - -tggctgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - acatgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaggaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttacatg