Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tggtctgaagcttagcctttgatatttaaggcgccttattcagacaattttattaattttcaagatttgcgcacttttaagtctctgcatttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA

Basic information

species Vitis vinifera
transcript Vv08s0007g02580.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G027378_T02 (Zea mays), 3'ss of exon 1
tggtctgaagcttagcctttgatatttaaggcgccttattcag-acaattttattaattttcaa-gatttgcgcacttttaagtctctgcatttcca----tgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA
      | || |     |||  ||    |   |  | ||| || | | |  || ||   ||||  |  || |   |||      ||    | |   |    |||||| ||||||||||||||  |  | ||||| || || |||||||| ||||| ||||| ||||| || || |||||||||||||||||||  |||||||| ||
------gtagttcctgtttttgtaacatataagattcatttagtagagtactagtagaattcattgcattacctgcttgcgtaactgacaaatgttaaaaatgcagTTCCTCGAAACTTCAGGCTATTAGAGGAGCTCGAGCGTGGAGAGAAGGGCATTGGTGATGGGACAGTGAGCTATGGAATGGATGATGCTGATGACATCTA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G071010_T03 (Zea mays), 3'ss of exon 1
tggtctgaagcttagcctttgatatttaaggcgccttattcagacaattttattaattttcaa-gatttgcgcacttttaagtctctgcatttcca----tgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA
     | |      |  ||||  |  ||         |||   | | |  || ||   ||||  |  || |   ||| |    ||    | |   |    |||||| || |||||||||||  |  | ||||| || || |||||||| ||||| ||||| ||||| || || |||||||||||||||||||  |||||||| ||
-----ttagttcctgtttttgtaaaatataatattgaattagtagagtactagtagaattcattgcattacctgcttgtgtaactgacaaatgataaaaatgcagTTCCCCGAAACTTCAGGCTATTAGAGGAGCTCGAGCGTGGAGAGAAGGGCATTGGTGATGGAACAGTGAGCTATGGAATGGATGATGCCGATGACATCTA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA10G09280.2 (Glycine max), 3'ss of exon 1
tggtctgaagcttagcctttgatatttaaggcgccttattcagacaattttatt-aattttcaagatttgcgcacttttaagtctctgcat-ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA
|  ||   |  | |  | |||||     |   ||  || | | |   | ||||| || |   ||  |||| |   | |||| | | || || ||  ||||||| ||| | |||||||||||||| ||||| ||||||||||||||||| || ||||||||||| || || |||||||||||||||||||| |||||||||||
ttatcaatatgtcatgcattgatcccacaatggc--tagttacattgtgttattcaaataaaaaagtttgtgttttgttaaatatttgtatgttaaatgcagTTCCTAGGAACTTCAGATTGCTGGAGGAGCTTGAACGTGGAGAAAAAGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA02G35990.1 (Glycine max), 3'ss of exon 1
tggtctgaagcttagcctttgat--atttaaggcgccttattcagacaattttattaattttcaagatttgcgcacttttaagtctctgcatttcca--tgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA
  ||    |   | | | |  ||  ||   |       || | | |   ||| |  |||    ||  |||| |  || |||| | | || || |  |  |||||| ||| | |||||||||||||| ||||| ||||||||||| ||||| || ||||||||||| || || |||||||||||||||||||| |||||||||||
--gtagatattcttgtcatgaattgatcccacaatggctagttacatgttttca--aataaaaaatgtttgtgttctgttaaatatttgtatgtttaaatgcagTTCCTAGGAACTTCAGATTGCTGGAGGAGCTTGAACGTGGTGAAAAAGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: PP1S490_20V6.1 (Physcomitrella patens), 3'ss of exon 2
tggtctgaagcttagcct-ttgatatttaaggcgccttattcagacaattttattaattttcaagatttg-cgcacttttaagtctctgcatttccat-gcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA
  |       | |||  | |||| || ||    | | ||| | ||   ||| |||     || || | ||  | | |      | | |   ||   || | ||| ||| | |||||  |  | || || ||||||||  | ||||| || |||||||| ||||| || ||||||||||| ||||| ||||| |||||| | | 
--gaagagttcatagaatgttgacatgtagctagtcgtatgctga-ggtttgattctcgctccagttctgatgtattaacttttgtttatgttcaaatcgtagTTCCTAGGAACTTTCGCCTTCTCGAAGAACTTGAGAGGGGAGAGAAAGGTATTGGCGATGGCACCGTCAGCTATGGCATGGACGATGGTGATGACGTATT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27586596|gb|CB009291.1|CB009291
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32271925|gb|CD721084.1|CD721084
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110707841|gb|EE084698.1|EE084698
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110375474|gb|EC940462.1|EC940462
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|87584965|gb|DY473918.1|DY473918
EST:     CACAGAAAAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110732951|gb|EE108687.1|EE108687
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|349822453|gb|FQ412717.1|FQ412717
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACCTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|26258536|gb|CA809599.1|CA809599
EST:     CCCAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTTCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110714378|gb|EE091219.1|EE091219
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110724375|gb|EE100150.1|EE100150
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAAGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351038696|gb|FQ464562.1|FQ464562
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|37183510|gb|CF602864.1|CF602864
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32270788|gb|CD719947.1|CD719947
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|27583675|gb|CB006370.1|CB006370
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110687069|gb|EE064159.1|EE064159
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110717388|gb|EE093211.1|EE093211
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110730308|gb|EE107240.1|EE107240
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|28968921|gb|CB347954.1|CB347954
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351019361|gb|FQ429523.1|FQ429523
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|349829575|gb|FQ421093.1|FQ421093
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32271546|gb|CD720705.1|CD720705
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110732231|gb|EE107337.1|EE107337
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110384897|gb|EC949365.1|EC949365
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|46917735|gb|CN547064.1|CN547064
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|349810098|gb|FQ401544.1|FQ401544
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110709713|gb|EE085412.1|EE085412
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110394930|gb|EC960357.1|EC960357
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110707782|gb|EE084575.1|EE084575
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110425147|gb|EC991525.1|EC991525
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110694527|gb|EE071709.1|EE071709
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351027465|gb|FQ444714.1|FQ444714
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110427088|gb|EC993519.1|EC993519
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110390632|gb|EC955552.1|EC955552
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30126250|gb|CB911589.1|CB911589
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|18459279|gb|BM437557.1|BM437557
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110714562|gb|EE091611.1|EE091611
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110410337|gb|EC976018.1|EC976018
EST:     AACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: -ACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110360971|gb|EC924417.1|EC924417
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110733131|gb|EE109052.1|EE109052
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|77580127|gb|DV218959.1|DV218959
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30322852|gb|CD006114.1|CD006114
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110724044|gb|EE099525.1|EE099525
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGT-G                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351022026|gb|FQ437813.1|FQ437813
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|28969001|gb|CB348034.1|CB348034
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32271584|gb|CD720743.1|CD720743
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110710620|gb|EE087153.1|EE087153
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351031308|gb|FQ445333.1|FQ445333
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|46917737|gb|CN547066.1|CN547066
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|349830651|gb|FQ416949.1|FQ416949
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30251839|gb|CB969572.1|CB969572
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|27584334|gb|CB007029.1|CB007029
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110397673|gb|EC963488.1|EC963488
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|34320462|gb|CF373216.1|CF373216
EST:     ACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTTGAGGAACTTGAACGTGGAGAAAAGGGT
genomic: ACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGC-TTGAGGAACTTGAACGTGGAGAAAAGGGT
EST: gi|110714642|gb|EE091779.1|EE091779
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110708726|gb|EE086599.1|EE086599
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30323632|gb|CD006894.1|CD006894
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110722674|gb|EE099112.1|EE099112
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32272487|gb|CD721646.1|CD721646
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30328344|gb|CD011606.1|CD011606
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32249430|gb|CD715249.1|CD715249
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110420507|gb|EC986781.1|EC986781
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110724748|gb|EE100845.1|EE100845
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|71870381|gb|DT019436.1|DT019436
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110723215|gb|EE100269.1|EE100269
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351028883|gb|FQ434884.1|FQ434884
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110413325|gb|EC979104.1|EC979104
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|161713525|gb|FC063126.1|FC063126
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30134219|gb|CB919557.1|CB919557
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110373778|gb|EC938122.1|EC938122
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32269247|gb|CD718406.1|CD718406
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32248493|gb|CD714312.1|CD714312
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32247778|gb|CD713597.1|CD713597
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110374794|gb|EC939726.1|EC939726
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351022650|gb|FQ428559.1|FQ428559
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110733055|gb|EE108882.1|EE108882
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|26257778|gb|CA808841.1|CA808841
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|32268908|gb|CD718067.1|CD718067
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|30127863|gb|CB913202.1|CB913202
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|349823964|gb|FQ417351.1|FQ417351
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110422900|gb|EC989234.1|EC989234
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|46917736|gb|CN547065.1|CN547065
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110703067|gb|EE079588.1|EE079588
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110697815|gb|EE075221.1|EE075221
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|110695767|gb|EE074160.1|EE074160
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
EST: gi|351040256|gb|FQ425342.1|FQ425342
EST:     CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGG                         TCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA
genomic: CACAGAAGAGTCACCCATGACGCTTGGCTCAGGAGGATCGAGTGTTGTGGgtgagtgtcc ... ttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aattttattaattttcaagatttgcgcacttttaagtctctgcatttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA
     tattaat  putative branch site (score: 2)
                                          catttcc  putative PPT
     tattaattttcaagat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tggtctgaagcttagcctttgatatttaaggcgccttattcagacaattttattaattttcaagatttgcgcacttttaagtctctgcatttccatgcagTCCCTCGAAACTTCAGATTGCTTGAGGAACTTGAACGTGGAGAAAAGGGTATTGGAGATGGTACTGTCAGCTATGGAATGGATGATGGAGATGACATTTA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATG
- - -tgaagct
- - - - - - - gcctttg
- - - - - - - - - - - - - - - - - - - - cagacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tctctgc