Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|30320869|gb|CD004131.1|CD004131EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|71877924|gb|DT026979.1|DT026979EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|71872288|gb|DT021343.1|DT021343EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|71879788|gb|DT028843.1|DT028843EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|110389558|gb|EC954409.1|EC954409EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|30251301|gb|CB969034.1|CB969034EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|71875745|gb|DT024800.1|DT024800EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|110399516|gb|EC966024.1|EC966024EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|351027143|gb|FQ440005.1|FQ440005EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|26266047|gb|CA817110.1|CA817110EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
EST:
gi|30251257|gb|CB968990.1|CB968990EST: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGG GTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
genomic: CGGTCAGGAACGAGTTCAAGCCCAGCGAGTTTGGCCGAATGCGCAAAAGGgtattgtctc ... tcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.cgatgacctttgattttggtatcatatttgattcaaagcttttcttcaataatagGTTGCTCGCATGCTCACTGTCAAACGGGAAAGGGAGATCGAGGAGGGAATCAACAAGAGGTTGTCAAGAAAGCTCGACCGGCAGTGGAAGAAAAGCATTG
atttgat putative branch site (score: 5)
cttttcttc putative PPT
ttttcttcaataata TA-rich tract