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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtagcaaattcaaaaccagatagtgaagtagaccagttggttatctataattcattatcttatcatgtaacatccctggataacaacagagaatcctcatgatcaaattcattttttctttagATGGCTACATTGGCCACTTACTTTGGACTTGGGCAGCAAAAGCACAG

Basic information

species Vitis vinifera
transcript Vv07s0031g00950.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aacatccctggataacaacagagaatcctcatgatcaaattcattttttctttagATGGCTACATTGGCCACTTACTTTGGACTTGGGCAGCAAAAGCACAG
         ggataac  putative branch site (score: 3)
                                       ttcattttttcttt  putative PPT
                                 atcaaattcatttttt  TA-rich tract