Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaataattcttttcgacccaattttgcctgttgtgctcggtttgtttgccgagaaaatctaggtcattttttcccaaattttatcggcgaccaaagggaggtactggatagttcctctaaattttttaattgttatgattgagaagtataatgatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGCTTATTTCTCGATGGTTGGTGTGTGTTGTGCGGTTTCAACGGCGTCGTTT

Basic information

species Vitis vinifera
transcript Vv07s0005g01250.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv07s0005g01250.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA10G01750.1 (Glycine max), 3'ss of exon 1
------gtaataattcttttcgaccc-aattt----tgcctgttgtgctcggtttgtttgccgagaa-aatctaggtc---attttttcccaaattttatcggcgaccaaagggaggtactggatagttcctctaa--------------attttttaattgttatgattgagaagtataatgatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGCTTATTTCTCGATGGTTGGTGTGTGTTGTGCGGTTTCAACGGCGTCGTTT
       |  | ||| || ||  ||| |||||    |   | || | ||  |  | || |  |||   ||| ||  ||   |   |  | ||| |   |  |||   ||     |   |||   | | || | | |              ||||| |||   || |||||  |  | ||  || ||  | || ||||| ||| |||||  ||| || ||  ||||||||||||||||||| || |||||||||||||| ||||| || || || || ||   ||| || |||
gtacgcatttttatttttatcatccctaattttatgtatttattattcttagaattttggatgagtctaatttaactccaaaggctggctcaagtgacaagggctgtcacttatatacactattttgatcatatgactaatccatgtgggattttctaacaattgtgattttgttgaatgttg-tggtttagAAATCTGCCGCGGCATCAGTTTGGGAACCTGCAAAGCAAGATGTTTCCGGCGTATTTCTCGATGGTGGGTGTCTGCTGCGCCGTATCGGTGGCTTCCTTT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110404850|gb|EC970374.1|EC970374
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|32244877|gb|CD710696.1|CD710696
EST:     GCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: GCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110363827|gb|EC927447.1|EC927447
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110406518|gb|EC972094.1|EC972094
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|32245090|gb|CD710909.1|CD710909
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|161716288|gb|FC066859.1|FC066859
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349823930|gb|FQ415341.1|FQ415341
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349824074|gb|FQ417461.1|FQ417461
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCCTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|351041831|gb|FQ456041.1|FQ456041
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTTGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110391769|gb|EC956769.1|EC956769
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|18457988|gb|BM436266.1|BM436266
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110388107|gb|EC952825.1|EC952825
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110395090|gb|EC960638.1|EC960638
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110410010|gb|EC975685.1|EC975685
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|26264315|gb|CA815378.1|CA815378
EST:     TGGGGCGCCGCTCTCTGGGGCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATA
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATA
EST: gi|46917756|gb|CN547085.1|CN547085
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110721353|gb|EE098255.1|EE098255
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|26266224|gb|CA817287.1|CA817287
EST:     GGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTG
genomic: -GGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTC-AAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTG
EST: gi|110407104|gb|EC972699.1|EC972699
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|26262184|gb|CA813247.1|CA813247
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110688818|gb|EE067802.1|EE067802
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349823929|gb|FQ415340.1|FQ415340
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110407882|gb|EC973500.1|EC973500
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349812917|gb|FQ410559.1|FQ410559
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349824982|gb|FQ406554.1|FQ406554
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110724199|gb|EE099820.1|EE099820
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|351024432|gb|FQ426241.1|FQ426241
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAG                         GAATCTTCCGAGGCATACGTTTGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349830579|gb|FQ416877.1|FQ416877
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|351048872|gb|FQ431537.1|FQ431537
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|30306151|gb|CB982945.1|CB982945
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349814247|gb|FQ398711.1|FQ398711
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|351034080|gb|FQ447998.1|FQ447998
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTTGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349829115|gb|FQ419647.1|FQ419647
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTTGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|349810871|gb|FQ405859.1|FQ405859
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATATGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110407690|gb|EC973301.1|EC973301
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110723673|gb|EE101255.1|EE101255
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110721177|gb|EE097879.1|EE097879
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110408179|gb|EC973805.1|EC973805
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|22011788|gb|BQ796822.1|BQ796822
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|110405129|gb|EC970664.1|EC970664
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|22012126|gb|BQ797160.1|BQ797160
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC
EST: gi|294966451|gb|GW839558.1|GW839558
EST:     TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAA                         GAATCTTCCGAGGCATACGTACGGTAATTTGCAAAGCAAGATGTTTCCTGC
genomic: TGGGGCGCCGCTCTCTGGGTCACCTTCATCGGCGGCATCATAATGTTCAAgtaataattc ... gatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atagttcctctaaattttttaattgttatgattgagaagtataatgatgactcagGAATCTTCCGAGGCATACGTTCGGTAATTTGCAAAGCAAGATGTTTCCTGCTTATTTCTCGATGGTTGGTGTGTGTTGTGCGGTTTCAACGGCGTCGTTT
                ttttaat  putative branch site (score: 3)
          taaattttttaattgt  TA-rich tract