Skip to another splice site:
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 5'  3'   		3  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttcgttattccccaatttctatttcttgcattggattttgcatttcttggattttgaatcaatttgtggcgttttctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG

Basic information

species Vitis vinifera
transcript Vv06s0061g01120.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G167872_T01 (Zea mays), 3'ss of exon 1
---------------------------------------------------------------gttcgttattccccaatttct----atttcttgcattggattttgcatttcttggattttgaa-tcaatttgtggcgttttctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
                                                                |||  ||| | |    | |     |  |  |||      |   | ||| |||   ||   |  ||    ||  || |      |||   || |||| ||||| |||||||| ||||| || || ||||||||||| || || || ||||| || || |||||||| ||||| ||||| || ||||||
gtgagagcctgctgccaccatatttcgggacccagatttcatctcatcagttatactagtataattcaatatgcacttggtacccaaaaagttctgctcccactcaagaattccttcccttcccatctcctgctgctgcttgggtggtggatctgaagACCATCAACCTGGCGGCTATCTGCACGCCGGCGGACTACAACACGCGCCCCCTCGACACCATCTACAGCAACTTCATCGATGCACTCCCAGTG

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA11G19550.1 (Glycine max), 3'ss of exon 1
--------------gttcgttattccccaatttctattt--cttgcattggattttgcatttcttggattttgaatcaatttgtggcgttttctttggtaa--------tgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
               ||  |  |||     ||| ||||    || |     || || ||||| |||  || | | ||| |||        |   |||||          | |||||||| |||||||| ||||| || ||||||||||| ||||| ||||| |||||||| || ||||||||||||||||| || || || || |||
gtaataataacatcatttctctttcttttctttttattctctttactccctatctttcattttttgttttattattca-tttactctacctcacttggtgtctctctctttcagACTATTAATCTGGCTGCGATTTGCACTCCCGCGGATTACAACACTCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTG

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA12G08930.1 (Glycine max), 3'ss of exon 1
gttcgttattccccaatttctatttcttgcattggattttgcatttcttggattttgaatcaatttgtggcgttttctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
  |  | || ||    ||||| ||||||    |   | ||  ||||  |          | |  | ||  |||||  ||      | |||||||| |||||||| || || || ||||||||||| ||||| || || |||||||| || ||||||||||||||||| || || || || |||
-gtaataataccttcttttctctttcttttcctctttgttttattttct----------ttacatcgtatcgtttctttctccgtttcagACTATTAATCTGGCTGCCATTTGCACTCCCGCGGATTACAACACCCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTG

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA12G30490.2 (Glycine max), 3'ss of exon 1
----gttcgttattccccaatttctatttcttgcattggattttgcatttcttggattttgaatcaatttgtggc-------gttttctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
          |||      || | || ||||  |   |||  || ||  |||| | || ||| |    || ||          |||| | |  |  | |||||||| |||||||| || || || ||||||||||| ||||| || || ||||| || || ||||||||||| ||||| || || ||||| |||
taaataaaactatatatatatatatacttctccccgcggagatt-caaatcttagtttgtgagttttcttatgagtttcacaattttgtgttttgttccagACTATTAATCTGGCTGCCATTTGCACTCCCGCGGATTACAACACGCGCCCTCTTGACACAATTTACAGCAACTTCATCGACGCGCTTCCTGTG

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AT2G27860.1 (Arabidopsis thaliana), 3'ss of exon 1
-----------------------------------------------------------------------gttcgttattccccaatttctatttcttgcattggattttgcatttcttggattttgaatcaatttgtggcgttt-tctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
                                                                        ||||||||  |  ||||   || | | ||| || |||  | ||   |    || |||   ||||  ||  |||| | |||||    ||||| ||| ||||| || |||||||||||||| || || |||||||| |||||||| ||||| || |||||||||||||||||||| |||||||| 
gtaaaaatgcttatcgatttcgttttttgatctcttgttcttcggtgtttatgatagaagtctcagatctgattcgttat--cggaattcagatgtttcgcaatgtattgag-atcggtgatgttgtgatgtaattc-tgatgtttctttttggattcgcagATTATAAATCTTGCTGCGATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATTGATGCGCTTCCAGTT

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: AT1G08200.1 (Arabidopsis thaliana), 3'ss of exon 1
------------------------------------------------gttcgttattccccaatttctatttcttgc-----attggattttgcatttcttggattttg---aatcaatttgtggc-gttttctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
                                                |   || |   | ||  |   |||  ||       || | |||| | |||       | |||   ||| ||| ||| |  ||| | || | |  ||||||| || ||||| || |||||||||||||| || || |||||||| |||||||| || || || |||||||||||||||||||| || ||||||
gtatttgttcttcgtttcttcttagtaaatcgttaatgtgaaaatgttgaatgtgaagactcagatctgattcgttatgtgaaatcgaatttcgaattgtggatgtcttgtttaattaatctgttgttgttgttttggattttgcagACGATAAATCTAGCTGCGATCTGTACTCCAGCAGATTACAATACGCGTCCTCTTGACACTATCTACAGCAATTTCATTGATGCTCTCCCAGTG

upper sequence: Vv06s0061g01120.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: PP1S379_19V6.1 (Physcomitrella patens), 3'ss of exon 1
------gttcgttattccccaatttctatttcttgcattggat--tttgcatttcttggattttgaatcaatttgtggcgttttctttggtaatg--cagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG-------
       ||   |      | ||         |||| ||   |  ||| ||||| || |||||   ||  |||  |     ||     |||  ||   ||  ||||||  |||| ||||| ||||| || || |||||||||||||||||||||||||| || |||||||| ||  | || ||||| || |||       
atgccgattacatgacttgcgatgaacggacgttgccttttttcattttcattttttcgatttgtgattgattactttgcattatgacggttttgattagGTTATCAACTTGGCTGCGATTTGTACGCCAGCTGACTACAATACTCGTCCTCTCGATACCATCTACAGCAACTTTGTAGACGCCCTGCCCGTGGTGCAAC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71863681|gb|DT012736.1|DT012736
EST:     ACATCGAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|110723599|gb|EE101093.1|EE101093
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|110720316|gb|EE096132.1|EE096132
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|294966676|gb|GW839667.1|GW839667
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71858409|gb|DT007464.1|DT007464
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71855119|gb|DT004174.1|DT004174
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|37187432|gb|CF606785.1|CF606785
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161711870|gb|FC057898.1|FC057898
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|37190355|gb|CF609704.1|CF609704
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161709143|gb|FC058403.1|FC058403
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|110723284|gb|EE100418.1|EE100418
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|110726996|gb|EE103281.1|EE103281
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71857785|gb|DT006840.1|DT006840
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161706361|gb|FC057565.1|FC057565
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71862919|gb|DT011974.1|DT011974
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161707259|gb|FC057334.1|FC057334
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|77584429|gb|DV221284.1|DV221284
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|33401793|gb|CF207420.1|CF207420
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCGCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161718332|gb|FC065009.1|FC065009
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|110685692|gb|EE062633.1|EE062633
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71858870|gb|DT007925.1|DT007925
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71872337|gb|DT021392.1|DT021392
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71860355|gb|DT009410.1|DT009410
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71862304|gb|DT011359.1|DT011359
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71859936|gb|DT008991.1|DT008991
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71865243|gb|DT014298.1|DT014298
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|46917845|gb|CN547174.1|CN547174
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71858968|gb|DT008023.1|DT008023
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACT-CAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71864546|gb|DT013601.1|DT013601
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCAATCTGTACTCCCGCGGACTACAATACT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACT
EST: gi|110713549|gb|EE089565.1|EE089565
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71873327|gb|DT022382.1|DT022382
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71868252|gb|DT017307.1|DT017307
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71862625|gb|DT011680.1|DT011680
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161720930|gb|FC070328.1|FC070328
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71862326|gb|DT011381.1|DT011381
EST:     ACATCGAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71858502|gb|DT007557.1|DT007557
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71862357|gb|DT011412.1|DT011412
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71861431|gb|DT010486.1|DT010486
EST:     ACATCGAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71861781|gb|DT010836.1|DT010836
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71864477|gb|DT013532.1|DT013532
EST:     ACATCGAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71859235|gb|DT008290.1|DT008290
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71870729|gb|DT019784.1|DT019784
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71886436|gb|DT035491.1|DT035491
EST:     ATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|161714110|gb|FC063822.1|FC063822
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
EST: gi|71862700|gb|DT011755.1|DT011755
EST:     ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTG                         ACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT
genomic: ACATCAAGCACGATTCGAGGCTCGAAGGACTCATCAAGATGGCAGATCTGgttcgttatt ... ggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attttgcatttcttggattttgaatcaatttgtggcgttttctttggtaatgcagACTATCAATCTGGCGGCGATCTGTACTCCCGCGGACTACAATACTCGTCCTCTCGATACGATTTACAGCAATTTCATTGATGCCCTTCCAGTG
                                     ttttctttg  CT-rich tract
                attttgaatcaattt  TA-rich tract