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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgatgctgcgatgacaatccattttttgagtgtgttgctgtcagagtactgtattcatttattgtagaaagaagagctgagattttcttgcttttttatttctttgacttgggaagGTGCAAGGATGCTCGTAGGTGGAATCCTAGATGATTCACCATCAACTGGTGTTCTTCTAAACCATTTCCCCACTCAAAGCACACTCAATTTAAAGGTCGA

Basic information

species Vitis vinifera
transcript Vv06s0009g01870.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgtagaaagaagagctgagattttcttgcttttttatttctttgacttgggaagGTGCAAGGATGCTCGTAGGTGGAATCCTAGATGATTCACCATCAACTGGTGTTCTTCTAAACCATTTCCCCACTCAAAGCACACTCAATTTAAAGGTCGA
                                        ctttgac  putative branch site (score: 4)
                     ttttcttgctttttta  CT-rich tract
                              ttttttatttctttga  TA-rich tract