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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtccaaagccacagtgcatctgctgattaagcctttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT

Basic information

species Vitis vinifera
transcript Vv05s0020g04790.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA17G00820.2 (Glycine max), 3'ss of exon 1
gtgagtccaaagccacagtgcatctgctgattaagcctttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGT------------GCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT
|||||| |     |    | |  |    |    | |  ||   ||||| |||  |  |   | ||| || ||   |||| || || || ||||||| |||  |||  |             |||||||||||||||||||||||| |||||||||||||| || ||| |||| || |||||        
gtgagttctccttctttctccgacgagagtgagacctatttgttgtttatga-atgttgaatatgcattttgc--aggcagACGTTGAGGTTGATGCGGCGGCAGCGGCAGGGGCAGCGCAGCCGAAGAAGAGAACGTTCAAGAAATTCAGCTTCAGGGGCGTGGATCTGGACGCGCTTCT--------

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA17G00820.1 (Glycine max), 3'ss of exon 1
gtgagtccaaagccacagtgcatctgctgattaagcctttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGT------------GCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT
|||||| |     |    | |  |    |    | |  ||   ||||| |||  |  |   | ||| || ||   |||| || || || ||||||| |||  |||  |             |||||||||||||||||||||||| |||||||||||||| || ||| |||| || |            
gtgagttctccttctttctccgacgagagtgagacctatttgttgtttatga-atgttgaatatgcattttgc--agGCAGACGTTGAGGTTGATGCGGCGGCAGCGGCAGGGGCAGCGCAGCCGAAGAAGAGAACGTTCAAGAAATTCAGCTTCAGGGGCGTGGATCTGGACGCGC------------

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA07G39980.1 (Glycine max), 3'ss of exon 1
gtgagtccaaagccacagtgcatctgctgattaagcctttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGC---------------------CCCAGGAGTGCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT
|||||| |     | |     |  | | ||   |    |  |   ||  | | | |  ||   ||       |  |||| || || || |||||||||||                       ||||   ||| ||||||||||||||||||||||||||||||||||| || |||                      
gtgagttcttcttctcccaagagattcagacctatttgtggtggcttcttaatgattgttgaatgtgcatgttgcagGCAGACGTTGAGGTTGATGTGGCGGCGGCGGCGGCGGCGGCGGCTGCAGGGCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGGGTGGATC---------------------

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA05G35030.1 (Glycine max), 3'ss of exon 1
-------------gtgagtccaaagccacagtg-catctgctgattaagcc--tttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGT------------GCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT
              |   ||     | ||| || |   || |   |  |    ||| ||||||||| | | ||    |        | |  |||| || || || || ||||||||  | | ||             |||||||||||||||||||||||||||||| |||||||| || ||| | ||||| |            
gtgagttattcttcttcttctccgacgacattgacgcttgatttctccgttattttttctgtttctaatggtcggaattaattgcatttgcagGCAGACGTTGAGGTCGATGTGGCGGCTGCAGCAGCAGCAGGGCAGCCGAAGAAGAGAACGTTCAAGAAGTTCAGTTTCAGGGGCGTGGATCTCGATGCGC------------

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GLYMA08G04690.2 (Glycine max), 3'ss of exon 1
------------------gtgagtccaaagccacagtgcatc--tgctgattaagcctttctctgtttctgacg---ttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT
                   |||     | |||  | | |     ||||| ||| |  ||    || |    | |   | | ||  | | |    ||| | |  ||||| |  |  |  |  ||  ||||  ||||||||||||||||||||||||||||||| ||  | || || ||| | |||||||            
gtgagttttccttctccgatgacattgacgcctaatttctgtgttgctgtttatgttttctgatggtctcaatgaattgcatttgcagGCAGACGTTGAAGTCGATGTGGCGGCAGCAGCAGCAGCAGGGCTGCCGAAGAAGAGAACGTTCAAGAAGTTCAGTTTTCGAGGCGTGGATCTCGATGCAC------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37188598|gb|CF607947.1|CF607947
EST:     TCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71877107|gb|DT026162.1|DT026162
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|37184100|gb|CF603454.1|CF603454
EST:     TCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110371821|gb|EC935945.1|EC935945
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|349828484|gb|FQ417226.1|FQ417226
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAAGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110694526|gb|EE071708.1|EE071708
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351025559|gb|FQ435252.1|FQ435252
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|18458131|gb|BM436409.1|BM436409
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110686946|gb|EE063924.1|EE063924
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77588158|gb|DV223290.1|DV223290
EST:     TCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110379769|gb|EC944988.1|EC944988
EST:     TACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351029306|gb|FQ436700.1|FQ436700
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|30251456|gb|CB969189.1|CB969189
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77577910|gb|DV217706.1|DV217706
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77578614|gb|DV218098.1|DV218098
EST:     CTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|349809166|gb|FQ398939.1|FQ398939
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGATGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|349830270|gb|FQ420530.1|FQ420530
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110407345|gb|EC972945.1|EC972945
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351017623|gb|FQ435976.1|FQ435976
EST:     CCTCTTACGATTAGGGTTCCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77583878|gb|DV220976.1|DV220976
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110695453|gb|EE073486.1|EE073486
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110364566|gb|EC927915.1|EC927915
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110381405|gb|EC934361.1|EC934361
EST:     TACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110424672|gb|EC991040.1|EC991040
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351027821|gb|FQ448391.1|FQ448391
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110688037|gb|EE066133.1|EE066133
EST:     CTTACGATTATGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|34416796|gb|CF415550.1|CF415550
EST:     GTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: GTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110394480|gb|EC959497.1|EC959497
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77584585|gb|DV221375.1|DV221375
EST:     CAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71867492|gb|DT016547.1|DT016547
EST:     ACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: ACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110689983|gb|EE066683.1|EE066683
EST:     TCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77586502|gb|DV222367.1|DV222367
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351041241|gb|FQ444218.1|FQ444218
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|30137318|gb|CB922656.1|CB922656
EST:     CTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71875245|gb|DT024300.1|DT024300
EST:     CTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110364798|gb|EC928306.1|EC928306
EST:     TTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77580555|gb|DV219173.1|DV219173
EST:     CAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110422790|gb|EC989121.1|EC989121
EST:     TTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110369440|gb|EC933600.1|EC933600
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110417618|gb|EC983688.1|EC983688
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110717213|gb|EE092875.1|EE092875
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|349829993|gb|FQ420253.1|FQ420253
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGGGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110428822|gb|EC995303.1|EC995303
EST:     TACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71873366|gb|DT022421.1|DT022421
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110702977|gb|EE079421.1|EE079421
EST:     CCTCTTACGCTTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCTAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|37188630|gb|CF607979.1|CF607979
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|30298176|gb|CB974970.1|CB974970
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110404697|gb|EC970161.1|EC970161
EST:     TCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|87583898|gb|DY473270.1|DY473270
EST:     TACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTC-ACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|37188986|gb|CF608335.1|CF608335
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351038157|gb|FQ465274.1|FQ465274
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGCGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110398814|gb|EC965289.1|EC965289
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71869424|gb|DT018479.1|DT018479
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71872025|gb|DT021080.1|DT021080
EST:     CCTCTTATGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77584128|gb|DV221103.1|DV221103
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77578085|gb|DV217809.1|DV217809
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110381380|gb|EC946709.1|EC946709
EST:     TACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: TACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110696352|gb|EE072395.1|EE072395
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110390782|gb|EC955710.1|EC955710
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|37184474|gb|CF603828.1|CF603828
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77577399|gb|DV217415.1|DV217415
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110397866|gb|EC963819.1|EC963819
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71876672|gb|DT025727.1|DT025727
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351015890|gb|FQ431845.1|FQ431845
EST:     ACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: ACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77577693|gb|DV217590.1|DV217590
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|22013129|gb|BQ798163.1|BQ798163
EST:     CNTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77581184|gb|DV219519.1|DV219519
EST:     CGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110396727|gb|EC962422.1|EC962422
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|77587718|gb|DV223038.1|DV223038
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71871968|gb|DT021023.1|DT021023
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|29783208|gb|CB349237.2|CB349237
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGGAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351014308|gb|FQ437310.1|FQ437310
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110414770|gb|EC980623.1|EC980623
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110397724|gb|EC963572.1|EC963572
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110690501|gb|EE067656.1|EE067656
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110731761|gb|EE106454.1|EE106454
EST:     CCTCTTACGCTTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCTAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110401901|gb|EC968526.1|EC968526
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|37184054|gb|CF603408.1|CF603408
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110383275|gb|EC947637.1|EC947637
EST:     CAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110401541|gb|EC968153.1|EC968153
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351040161|gb|FQ425247.1|FQ425247
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71873638|gb|DT022693.1|DT022693
EST:     CTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|71866028|gb|DT015083.1|DT015083
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|351016861|gb|FQ424288.1|FQ424288
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110692442|gb|EE071688.1|EE071688
EST:     CCTCTTACGATTACGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
EST: gi|110368900|gb|EC933034.1|EC933034
EST:     CCTCTTACGATTAGGGTTTCAGACTCCCATCTCCAGATTCTTCAACCATG                         GCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC
genomic: CCTCTTACGATTAGGGTTTCAGACTCCCGTCTCCAGATTCTTCAACCATGgtgagtccaa ... ttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgctgattaagcctttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT
                        ttctgac  putative branch site (score: 2)
             cctttctctgtttctg  CT-rich tract
     tgattaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagtccaaagccacagtgcatctgctgattaagcctttctctgtttctgacgttctttctctgccttctgtttagGCGGATGTCGAAGTTGATGTGGCCCCAGGAGTGCCGAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCACTTCTCGACATGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TCAGCT