1 5' 3' | 2 5' 3' | 3 5' 3' |
gttctctctcatttacttcaattcattgaattcccgtaaaattttctatgggaaagtttattcccgggaaccaaacagagcattttggatttattttttttaatactctttttgctgagatttgggttatgtgttttttgtattagCGAGGAAAGGAAGTTTGTTTGTGGTAAGATCTGATGGGAGGCCGTCGCTTGGTTCTTCCCCGCGGAGCCGCGGTGCTCAACGCTTGATTACTAATGCAGT
species | Vitis vinifera |
transcript | Vv04s0043g00720.t01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTGCCTCCTGCCGAGAAATTCCACTCACAATCTCCCAGATTCCTCTCAG CGAGGAAAGGAAGTTTGTTTGTGGTCAGATCTGATGGGAGGCCGTCGCTTGEST: gi|110730292|gb|EE107208.1|EE107208
genomic: TCTGCCTCCTGCCGAGAAATTCCACTCACAATCTCCTAGATTCGTCTCAGgttctctctc ... tttgtattagCGAGGAAAGGAAGTTTGTTTGTGGTAAGATCTGATGGGAGGCCGTCGCTTG
EST: TCTGCCTCCTGCCGAGAAATTCCACTCACAATCTCCCAGATTCCTCTCAG CGAGGAAAGGAAGTTTGTTTGTGGTCAGATCTGATGGGAGGCCGTCGCTTGEST: gi|110376240|gb|EC941289.1|EC941289
genomic: TCTGCCTCCTGCCGAGAAATTCCACTCACAATCTCCTAGATTCGTCTCAGgttctctctc ... tttgtattagCGAGGAAAGGAAGTTTGTTTGTGGTAAGATCTGATGGGAGGCCGTCGCTTG
EST: TCTGCCTCCTGCCGAGAAATTCCACTCACAATCTCCTAGATTCGTCTCAG CGAGGAAAGGAAGTTTGTTTGTGGTCAGATCTGATGGGAGGCCGTCGCTTG
genomic: TCTGCCTCCTGCCGAGAAATTCCACTCACAATCTCCTAGATTCGTCTCAGgttctctctc ... tttgtattagCGAGGAAAGGAAGTTTGTTTGTGGTAAGATCTGATGGGAGGCCGTCGCTTG
tattttttttaatactctttttgctgagatttgggttatgtgttttttgtattagCGAGGAAAGGAAGTTTGTTTGTGGTAAGATCTGATGGGAGGCCGTCGCTTGGTTCTTCCCCGCGGAGCCGCGGTGCTCAACGCTTGATTACTAATGCAGT
ttttaat putative branch site (score: 3)
tgtttttt putative PPT
tttttaatactctttt TA-rich tract