Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ccttgggtcttggcctgatttttcatgttttacctttctacaagaaaatgtattttctttcatgaggaacccaaatggttactttcaaaattaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCACTACGAACCAGGGACTACTCGAGGTGGCCAGACAAGCCAGAGGGGTGGA

Basic information

species Vitis vinifera
transcript Vv04s0023g03370.t01
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0023g03370.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: LOC_Os04g56700.1 (Oryza sativa), 3'ss of exon 1
ccttgggtcttggcctgatttttcatgttttacctttctacaagaaaatgtattttctttcatgaggaacccaaatggttact-ttcaaaattaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCACTACGAACCAGGGACTACTCGAGGTGGCCAGACAAGCCAGAGGGGTGGA
  |       |    ||     ||    | ||      | ||| | | |      | |    | |       | | | |||   || |   | |  ||||||| ||||| ||| |||||||||| |||||||| ||||||||||| |||||  |     || | ||||||||| ||||||| |||||||| | ||||||| 
-ttaaaacaatacagtgtacagtctctgtgtagtcacgtccaatatatttgtcagtttcaatttacagttttacacgtttagagtttactgtaacgtgcagGGTGAAGCGGTGAAAGACTGGCGGGAGATCGTGACCTACTTCTCGTACCCGGTGAAGTCCCGCGACTACTCGCGGTGGCCCGACAAGCCGGCGGGGTGGC

upper sequence: Vv04s0023g03370.t01 (Vitis vinifera), 3'ss of exon 1
lower sequence: GRMZM2G062396_T01 (Zea mays), 3'ss of exon 1
ccttgggtcttggcctgatttttcatgttttac---ctttctacaagaaaatgtattttctttcatgaggaacccaaatggttactttcaaaattaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCACTACGAACCAGGGACTACTCGAGGTGGCCAGACAAGCCAGAGGGGTGGA
      || |||   |  ||  |||||         | | ||||| |   ||||  |||  |     | | |  || ||   |  | ||        | |||||| || || ||||| |||||||| |||||||| ||||||||||| |||||  |     || | ||||||||  ||||||| |||||||| | || |||| 
------gttttg-tatatttactcatgccgggtgcgcctactacatgctgatgtgatttactcatgcatgcatgcatatatatggtctcg----ctctcgcagGGGGAGGCGGTGCAGGACTGGCGTGAGATCGTGACCTACTTCTCGTACCCGGTGAAGGCCCGCGACTACTCCCGGTGGCCTGACAAGCCGGCGGCGTGGC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|77577222|gb|DV217312.1|DV217312
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71871009|gb|DT020064.1|DT020064
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         NGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|77581264|gb|DV219565.1|DV219565
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|33404925|gb|CF210552.1|CF210552
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTGACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|37188375|gb|CF607724.1|CF607724
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACT
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACT
EST: gi|77577437|gb|DV217448.1|DV217448
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71884487|gb|DT033542.1|DT033542
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71873356|gb|DT022411.1|DT022411
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110373938|gb|EC938957.1|EC938957
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|33405449|gb|CF211076.1|CF211076
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161718584|gb|FC069325.1|FC069325
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30255544|gb|CB971676.1|CB971676
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110701083|gb|EE078300.1|EE078300
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110699483|gb|EE076531.1|EE076531
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110698757|gb|EE076623.1|EE076623
EST:     GCGGCTTCTTCCTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: GCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|33405291|gb|CF210918.1|CF210918
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110732223|gb|EE107322.1|EE107322
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|352781820|gb|FQ469118.1|FQ469118
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30251599|gb|CB969332.1|CB969332
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110703765|gb|EE080895.1|EE080895
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71872209|gb|DT021264.1|DT021264
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71882584|gb|DT031639.1|DT031639
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110684720|gb|EE062323.1|EE062323
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110684963|gb|EE062838.1|EE062838
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71862581|gb|DT011636.1|DT011636
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110685239|gb|EE063434.1|EE063434
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|352785583|gb|FQ475586.1|FQ475586
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110685019|gb|EE062958.1|EE062958
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110698831|gb|EE076777.1|EE076777
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110685288|gb|EE063539.1|EE063539
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161715076|gb|FC064258.1|FC064258
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71881722|gb|DT030777.1|DT030777
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|37187698|gb|CF607051.1|CF607051
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161707290|gb|FC057695.1|FC057695
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30251615|gb|CB969348.1|CB969348
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161714902|gb|FC064524.1|FC064524
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71871763|gb|DT020818.1|DT020818
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110685403|gb|EE062092.1|EE062092
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161712809|gb|FC062332.1|FC062332
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCGTCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110690001|gb|EE066716.1|EE066716
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110698062|gb|EE075648.1|EE075648
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110732333|gb|EE107530.1|EE107530
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|33403949|gb|CF209576.1|CF209576
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30296066|gb|CB972860.1|CB972860
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCGTCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71866207|gb|DT015262.1|DT015262
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110429602|gb|EC996098.1|EC996098
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|294964077|gb|GW837880.1|GW837880
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30256133|gb|CB971976.1|CB971976
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71877321|gb|DT026376.1|DT026376
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71875255|gb|DT024310.1|DT024310
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71876855|gb|DT025910.1|DT025910
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110376324|gb|EC941378.1|EC941378
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71873921|gb|DT022976.1|DT022976
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|34542905|gb|CF511137.1|CF511137
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110687276|gb|EE064555.1|EE064555
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|87586511|gb|DY474756.1|DY474756
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110702100|gb|EE080424.1|EE080424
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30256270|gb|CB972113.1|CB972113
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161716609|gb|FC065555.1|FC065555
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|33402575|gb|CF208202.1|CF208202
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110685869|gb|EE062964.1|EE062964
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|77582910|gb|DV220446.1|DV220446
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30297296|gb|CB974090.1|CB974090
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCCACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110709501|gb|EE085017.1|EE085017
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|77588416|gb|DV223416.1|DV223416
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110731749|gb|EE106435.1|EE106435
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|27755222|gb|CB035977.1|CB035977
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161711755|gb|FC059990.1|FC059990
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|30299454|gb|CB976248.1|CB976248
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110699225|gb|EE076035.1|EE076035
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110727210|gb|EE103713.1|EE103713
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110698874|gb|EE076868.1|EE076868
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|349828670|gb|FQ418405.1|FQ418405
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110693354|gb|EE069514.1|EE069514
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110732972|gb|EE108736.1|EE108736
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|161719415|gb|FC067370.1|FC067370
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|156736470|gb|EV240591.1|EV240591
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|352794780|gb|FQ475275.1|FQ475275
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71868684|gb|DT017739.1|DT017739
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110686929|gb|EE063893.1|EE063893
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|352777798|gb|FQ466851.1|FQ466851
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|71864279|gb|DT013334.1|DT013334
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
EST: gi|110699150|gb|EE075897.1|EE075897
EST:     ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAA                         GGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA
genomic: ACATGTCTGGTGGCAAGAAAGGCGGCTTCATCGTTTCCAGCCATCTTCAAgtaattctct ... ttaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaatgtattttctttcatgaggaacccaaatggttactttcaaaattaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCACTACGAACCAGGGACTACTCGAGGTGGCCAGACAAGCCAGAGGGGTGGA
                                           aattaat  putative branch site (score: 3)
                                 ttactttcaaaattaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ccttgggtcttggcctgatttttcatgttttacctttctacaagaaaatgtattttctttcatgaggaacccaaatggttactttcaaaattaattgcagGGAGAAGCAGTGCAAGACTGGCGCGAGATCGTAACCTACTTCTCCTACCCACTACGAACCAGGGACTACTCGAGGTGGCCAGACAAGCCAGAGGGGTGGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - -ggcctga
- - - - - - - - - - - tcatgtt
- - - - - - - - - - - - - - - - - - - - -aagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aacccaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttcaaaa