Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttttccatcttctaccttgttttcttttctaggagtattcttgtatagaagatattagctagcactttccattcatggtggggcttgtgtagaaactgatgttttacagGGCAACAGGAGAAAAAGACGTAAGATTCAAGGTGTTGTACTGTGGAATACGTCACTCAGACCTACACATGATCAAGAATGAATGGGGCAAGTCCAGATAC

Basic information

species Vitis vinifera
transcript Vv00s0371g00060.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttagctagcactttccattcatggtggggcttgtgtagaaactgatgttttacagGGCAACAGGAGAAAAAGACGTAAGATTCAAGGTGTTGTACTGTGGAATACGTCACTCAGACCTACACATGATCAAGAATGAATGGGGCAAGTCCAGATAC
                                       aactgat  putative branch site (score: 3)
 atgtttta  TA-rich tract