1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaagccacgaagctccaagttttcttgctaaattttaagttgttctcctctccaagGACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAATTGTAAGTAATGGAGTAGTTTCTTTCCAGGTAATAATTTTTGTCAAGGT
species | Selaginella moellendorffii |
transcript | EFJ33041 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAG GACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAAEST: gi|169113489|gb|FE515024.1|FE515024
genomic: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAGgtaaagccac ... cctctccaagGACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAA
EST: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAG GACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAAEST: gi|169059846|gb|FE468365.1|FE468365
genomic: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAGgtaaagccac ... cctctccaagGACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAA
EST: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAG GACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAAEST: gi|169088518|gb|FE491482.1|FE491482
genomic: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAGgtaaagccac ... cctctccaagGACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAA
EST: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAG GACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAA
genomic: ACCGATCCATGGAGCGCTCTCTGACGGATGAGGAAGTAAATGCCATTCAGgtaaagccac ... cctctccaagGACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAA
aagccacgaagctccaagttttcttgctaaattttaagttgttctcctctccaagGACAAAGTGAGGGAGGAAGTCGCAAAGCAGCTGCAAGTTACGCTGAGATAATTGTAAGTAATGGAGTAGTTTCTTTCCAGGTAATAATTTTTGTCAAGGT
tgctaaa putative branch site (score: 26)
ttgttctcctctcc putative PPT
taaattttaagttgtt TA-rich tract