1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttcaggcaagatctcgttgtctttgatgtttcaaggaagagaaaaaaatctgtgtttgctcgtcgtttttgcagATCATAAACAAAGATGGTGTCCAGGAAGCCGCCAGAGAAACCGACGGTTTCTTCATCAATTGTGGGATCGTGACAGTGATAAAAGACGCGGTCATTCCAA
species | Selaginella moellendorffii |
transcript | EFJ17026 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169112708|gb|FE515084.1|FE515084
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169112708|gb|FE515084.1|FE515084
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169112708|gb|FE515084.1|FE515084
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169112708|gb|FE515084.1|FE515084
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169054368|gb|FE460813.1|FE460813
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169054368|gb|FE460813.1|FE460813
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169054368|gb|FE460813.1|FE460813
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169054368|gb|FE460813.1|FE460813
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169054368|gb|FE460813.1|FE460813
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169049447|gb|FE459853.1|FE459853
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169049447|gb|FE459853.1|FE459853
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169049447|gb|FE459853.1|FE459853
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169049447|gb|FE459853.1|FE459853
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169049447|gb|FE459853.1|FE459853
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169088449|gb|FE495495.1|FE495495
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169088449|gb|FE495495.1|FE495495
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169088449|gb|FE495495.1|FE495495
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169088449|gb|FE495495.1|FE495495
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC GEST: gi|169088449|gb|FE495495.1|FE495495
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
EST: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAAC G
genomic: GTGTGGTGAGGCGAGCAATTGTGGACAAGAACGCGCGAATTGGACAAAACgttcaggcaa ... gtttttgcag-
tctttgatgtttcaaggaagagaaaaaaatctgtgtttgctcgtcgtttttgcagATCATAAACAAAGATGGTGTCCAGGAAGCCGCCAGAGAAACCGACGGTTTCTTCATCAATTGTGGGATCGTGACAGTGATAAAAGACGCGGTCATTCCAA
ctttgat putative branch site (score: 5)
tcgttttt putative PPT
agaaaaaaat TA-rich tract