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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacaaagttatagtttactctccagagtctcctcttacatttttttctctttgtttttcagGCCTGGCCGGCGCCATGCTAGAACGTGTTTGTGTCACCAAAAATATCCTT

Basic information

species Selaginella moellendorffii
transcript EFJ15316
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gttatagtttactctccagagtctcctcttacatttttttctctttgtttttcagGCCTGGCCGGCGCCATGCTAGAACGTGTTTGTGTCACCAAAAATATCCTT
                         ctcttac  putative branch site (score: 3)
                     tctcctcttacatttt  CT-rich tract
                          tcttacattttttt  TA-rich tract