1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtacgttcttgctcgccttcgaacattggaaagttaaccttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAGGGCCATACTGATAACGTTCGAAGCTTGCTCTTGGATCCGTCGGGAAG
species | Selaginella moellendorffii |
transcript | EFJ37688 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAG GCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAGEST: gi|169026297|gb|FE433388.1|FE433388
genomic: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAGgtacgttctt ... ttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAG
EST: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAG GCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAGEST: gi|169087203|gb|FE493111.1|FE493111
genomic: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAGgtacgttctt ... ttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAG
EST: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAG GCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAGEST: gi|169099050|gb|FE501771.1|FE501771
genomic: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAGgtacgttctt ... ttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAG
EST: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAG GCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAGEST: gi|169025642|gb|FE436555.1|FE436555
genomic: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAGgtacgttctt ... ttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAG
EST: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAG GCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAG
genomic: TTGCCATCAACGATGCTGGAACCGTGCTTGTCTCCGGAGGCACGGAAAAGgtacgttctt ... ttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAG
gtacgttcttgctcgccttcgaacattggaaagttaaccttttcaatagGCTGTAAGAGTATGGGATCCAAGAAGTGGTGCAAAGCAAATGAAGTTGAAGGGCCATACTGATAACGTTCGAAGCTTGCTCTTGGATCCGTCGGGAAG
agttaac putative branch site (score: 30)
ccttttc CT-rich tract
ttttcaata TA-rich tract