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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcaagaattccacatccagaccctaaagttcaaagaaatccttctctaatctctcgagaatgccagctttacctgaaagGTGGTGGCTTTGATGCACTGAAGCGATACAAAGACGAGGCTGATTTCTTCTTTTGTGCAACACTTCCAAACACGTCTCAAACCCAAGTTGATAGAACCCC

Basic information

species Selaginella moellendorffii
transcript EFJ32553
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaagttcaaagaaatccttctctaatctctcgagaatgccagctttacctgaaagGTGGTGGCTTTGATGCACTGAAGCGATACAAAGACGAGGCTGATTTCTTCTTTTGTGCAACACTTCCAAACACGTCTCAAACCCAAGTTGATAGAACCCC
                   ctctaat  putative branch site (score: 3)
                                          ctttacct  putative PPT
       aaagaaat  TA-rich tract