1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgagtagcttttttagtttagatctcgattgagcaagcaaggaaaggaagaagaagaaaaaatctcggagaaagttctcacctttttgaacagTTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAATGGCGTGTACGAGCTAGGCTGTGGACTTGACAAGATAGTCATGTCATGGG
species | Selaginella moellendorffii |
transcript | EFJ20873 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAG TTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCNATEST: gi|169062201|gb|FE469715.1|FE469715
genomic: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAGgtgagtagct ... ttttgaacagTTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAAT
EST: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAG TTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAATEST: gi|169044880|gb|FE451972.1|FE451972
genomic: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAGgtgagtagct ... ttttgaacagTTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAAT
EST: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAG TTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAATEST: gi|169044881|gb|FE451973.1|FE451973
genomic: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAGgtgagtagct ... ttttgaacagTTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAAT
EST: ATACATTCCCGCTAGGATGCCCGTTTAGCANATCGATCGTGCACTCGGAG TTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCNAT
genomic: ATACATTCCCGCTAGGATGCCCGTTTAGCAAATCGATCGTGCACTCGGAGgtgagtagct ... ttttgaacagTTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAAT
aaggaaaggaagaagaagaaaaaatctcggagaaagttctcacctttttgaacagTTTTTTGACAGAAACCCAGATTCTCGTGACCCCAGGTTTAACACCGGCAATGGCGTGTACGAGCTAGGCTGTGGACTTGACAAGATAGTCATGTCATGGG
ttctcac putative branch site (score: 22)
ttctcaccttttt CT-rich tract
aagaaaaaat TA-rich tract