1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtaagtcaatgtagctcttttaaagtttttgtcctcacactgtgtaatgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGATGATCCTTTGT
species | Selaginella moellendorffii |
transcript | EFJ19450 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGA GTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGATEST: gi|169088831|gb|FE494395.1|FE494395
genomic: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGAgtaagtcaat ... tgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGAT
EST: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGA GTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGATEST: gi|169073338|gb|FE481102.1|FE481102
genomic: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGAgtaagtcaat ... tgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGAT
EST: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGA GTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGATEST: gi|169022198|gb|FE431807.1|FE431807
genomic: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGAgtaagtcaat ... tgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGAT
EST: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGA GTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGATEST: gi|169056297|gb|FE464107.1|FE464107
genomic: TTGGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTCAACCCGCAACGAgtaagtcaat ... tgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGAT
EST: GGAAAACTTGACTTGTATGTTGCTGCCGCTGGATTNCA-CCCGNCA-CGA GTTCTTCCTGTAATGATCGATGTCGGGACAAACA-TANAAAATTTGT-AG
genomic: GGAAAACTTGACTTGTATGTTGCTGCCGCTGGATT-CAACCCG-CAACGAgtaagtcaat ... tgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATT-GTTAG
aagtcaatgtagctcttttaaagtttttgtcctcacactgtgtaatgtgctatagGTTCTTCCTGTAATGATCGATGTCGGGACAAACAATAAAAAATTGTTAGATGATCCTTTGT
tcctcac putative branch site (score: 12)
tcttttaaagttttt TA-rich tract