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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgaatgtttgcccgaaagacaagaactaatctccgattgcgctgctgcaggagataccaaaaacgagcgaagacataagcatagagctgacttcgctgctcaaaccttcggagtggatcatgagatttgaagacgtgaactgctcacaaagGAATTCCACAGATCTTTGGGCCCGAGCACGACAAAATCTTTCCGTTTGATCCGTTACTGGTTCCGCCAGAATTGGATGGTGAGCGGATTTGGACTCGTTC

Basic information

species Selaginella moellendorffii
transcript EFJ09273
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgctcaaaccttcggagtggatcatgagatttgaagacgtgaactgctcacaaagGAATTCCACAGATCTTTGGGCCCGAGCACGACAAAATCTTTCCGTTTGATCCGTTACTGGTTCCGCCAGAATTGGATGGTGAGCGGATTTGGACTCGTTC
                                            tgctcac  putative branch site (score: 2)
                            atttgaa  TA-rich tract