1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' | 34 5' 3' | 35 5' 3' | 36 5' 3' | 37 5' 3' | 38 5' 3' | 39 5' 3' | 40 5' 3' |
41 5' 3' | 42 5' 3' | 43 5' 3' | 44 5' 3' | 45 5' 3' | 46 5' 3' | 47 5' 3' | 48 5' 3' | 49 5' 3' | 50 5' 3' |
gtaagcagagtgcgattgcacgaggagagtgcacgacatcctacgtaaatttctctagctctgtgcataatagaacttacatcagcgaagcccgttctctttccagtttcatccgctgatcggtactttcgtttttgtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACGATTGGGTTGTACGAGTTGTATCGTATAACTCAGTTATATCCTCAG
species | Selaginella moellendorffii |
transcript | EFJ11209 |
intron # | 46 |
splice site | 3' |
intron type | U2 |
EST: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAA -A-G--TTAGCAGCGGTTTTTAAAAAGATTGGAGACAAGCAAACGTGCACGEST: gi|169100104|gb|FE501863.1|FE501863
genomic: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAAgtaagcagag ... gtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACG
EST: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAA CAAGAGTTAGCAGCGGTTTTAAA-AAGATTGGEST: gi|169022630|gb|FE428357.1|FE428357
genomic: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAAgtaagcagag ... gtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGG
EST: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAA CAAGAGTTAGCAGCGGTTTTTAAAAAGATTGGAGACAAGCAAACGTGCACGEST: gi|169077690|gb|FE484952.1|FE484952
genomic: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAAgtaagcagag ... gtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACG
EST: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAA CAAGAGTTAGCAGCGGTTTTTAAAAAGATTGGAGACAAGCAAACGTGCACGEST: gi|169081005|gb|FE486122.1|FE486122
genomic: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAAgtaagcagag ... gtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACG
EST: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAA CAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACGEST: gi|169062797|gb|FE472846.1|FE472846
genomic: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAAgtaagcagag ... gtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACG
EST: CAAATGNGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAA CAAGAGTTAGCAGCGGTTTTTAAGAAAGAT-GGAGACAAGCAAACGTGCA
genomic: CAAATGGGCCGGCTTCTCCTGCTGGTCATACGGCTGAGGCACAATTGAAAgtaagcagag ... gtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAA-GATTGGAGACAAGCAAACGTGCA
ccgttctctttccagtttcatccgctgatcggtactttcgtttttgtttgcacagCAAGAGTTAGCAGCGGTTTTTAAGAAGATTGGAGACAAGCAAACGTGCACGATTGGGTTGTACGAGTTGTATCGTATAACTCAGTTATATCCTCAG
cgctgat putative branch site (score: 15)
ctttcgtttttgttt putative PPT
tttttgttt TA-rich tract