1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' | 34 5' 3' | 35 5' 3' | 36 5' 3' | 37 5' 3' | 38 5' 3' | 39 5' 3' | 40 5' 3' |
41 5' 3' | 42 5' 3' | 43 5' 3' |
gtaaagaggatcatgatgaaatttttcctggattgattctcttgtttgttttcgtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACTCATACCATCCCGGTTTAGTCCAATCTCTCTTTCGTGCTTTCATTCCACA
species | Selaginella moellendorffii |
transcript | EFJ17505 |
intron # | 43 |
splice site | 3' |
intron type | U2 |
EST: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAG GAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACTEST: gi|169088050|gb|FE494680.1|FE494680
genomic: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAGgtaaagagga ... gtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACT
EST: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAG GAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACTEST: gi|169047639|gb|FE454807.1|FE454807
genomic: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAGgtaaagagga ... gtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACT
EST: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAG GAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACTEST: gi|169087238|gb|FE495720.1|FE495720
genomic: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAGgtaaagagga ... gtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACT
EST: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAG GAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACTEST: gi|169087237|gb|FE495719.1|FE495719
genomic: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAGgtaaagagga ... gtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACT
EST: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAG GAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACT
genomic: AGCGTCTCAGCACAAGCGTTGCAGTGCCAAGAGTTCCTGCGGGAACACAGgtaaagagga ... gtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACT
gatcatgatgaaatttttcctggattgattctcttgtttgttttcgtgattccagGAGATAGCGCTGTTCCTCGTCTCAGATTGCTACGTTGGCCTCGATCAAACTCATACCATCCCGGTTTAGTCCAATCTCTCTTTCGTGCTTTCATTCCACA
gattgat putative branch site (score: 10)
ttttcgt putative PPT
atgaaattttt TA-rich tract