1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagctttggtaagcctcgatgaaatcatgacttgtgcatcaatctgtttatgctgtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGTCTTTTGAGCTGGAAATATTCTTCAAG
species | Selaginella moellendorffii |
transcript | EFJ33041 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTG GGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTEST: gi|169113490|gb|FE515025.1|FE515025
genomic: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTGgtaagctttg ... gtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATT
EST: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTG GGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGTEST: gi|169041637|gb|FE449572.1|FE449572
genomic: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTGgtaagctttg ... gtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGT
EST: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTG GGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGTEST: gi|169088518|gb|FE491482.1|FE491482
genomic: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTGgtaagctttg ... gtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGT
EST: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTG GGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGT
genomic: TGTAAAGGATCTGAAAGAAACTCTCGAGGGTCTTGCCAAACGACTCTTTGgtaagctttg ... gtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGT
taagcctcgatgaaatcatgacttgtgcatcaatctgtttatgctgtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGTCTTTTGAGCTGGAAATATTCTTCAAG
atgaaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagctttggtaagcctcgatgaaatcatgacttgtgcatcaatctgtttatgctgtaatggcagGGAACGTAGAGATGCGATGGATAGACACGTACTTCCCATTCACCAATCCGTCTTTTGAGCTGGAAATATTCTTCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA