1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtatatgagaaatagttgtggaaaacgttgaactgatgagagttttcagGAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTCGAAATTCAAGTCCTCTGCAAGGCTCACCACTTCAACTTG
species | Selaginella moellendorffii |
transcript | EFJ24569 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAG GAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTCEST: gi|169113712|gb|FE514805.1|FE514805
genomic: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAGgtatatgaga ... gagttttcagGAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTC
EST: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAG GAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTCEST: gi|169028574|gb|FE439937.1|FE439937
genomic: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAGgtatatgaga ... gagttttcagGAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTC
EST: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAG GAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTCEST: gi|70670401|gb|DN838978.1|DN838978
genomic: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAGgtatatgaga ... gagttttcagGAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTC
EST: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAG GAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTANTGGT
genomic: TCGGGCAGGGAGCTTACGGCTCGGTGTTTCATGGGAATCTTCGTAATCAGgtatatgaga ... gagttttcagGAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTA-TGGT
gtatatgagaaatagttgtggaaaacgttgaactgatgagagttttcagGAAGTGGCAGTAAAGAGAATGAAAGCTACCAAAGCGAAGGAGTTTATGGTCGAAATTCAAGTCCTCTGCAAGGCTCACCACTTCAACTTG
aactgat putative branch site (score: 11)
ttttc putative PPT
aaatagtt TA-rich tract