1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...cgtgtttgtttgcttgcgctcaggttcagacctttccagctcgtctgctggtcaagtctactttaaactgggcctagctgcttttgagaattctttatagGTTTTACGACTGCAACGGATCTGGAACG
species | Selaginella moellendorffii |
transcript | EFJ24034 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
tgctggtcaagtctactttaaactgggcctagctgcttttgagaattctttatagGTTTTACGACTGCAACGGATCTGGAACG
ttctttat CT-rich tract
aattctttata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cgtgtttgtttgcttgcgctcaggttcagacctttccagctcgtctgctggtcaagtctactttaaactgggcctagctgcttttgagaattctttatagGTTTTACGACTGCAACGGATCTGGAACG
-gtgtttg
- - - - tttgctt
- - - - - - - - - - - - - - - - - -ccagctc
- - - - - - - - - - - - - - - - - - - - - - - gctggtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgctttt