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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggcagcttataagttctcgattcaaaatagcatacctctgacgagctcgcatggtttttggtttttactcttcaagTTTATCAACCAAGGTGGAAGGTTCGACCTCGCTGGAATCGGAGCCTCGGTGGCCTTCGCCACAAGCCTTATCATGTGGATCACTGCAATAAAACCCGTGA

Basic information

species Selaginella moellendorffii
transcript EFJ17226
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcaaaatagcatacctctgacgagctcgcatggtttttggtttttactcttcaagTTTATCAACCAAGGTGGAAGGTTCGACCTCGCTGGAATCGGAGCCTCGGTGGCCTTCGCCACAAGCCTTATCATGTGGATCACTGCAATAAAACCCGTGA
              ctctgac  putative branch site (score: 3)
                                        tttttactcttc  putative PPT
                                        tttttact  TA-rich tract