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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaacaaatcaattgcaaacctttactaaagatttgttcactcgtctcgtagATATTCGAATCTAAATGGCAACGCAATTTACAAGAGCGAGGCTTGTGTTTGATCCCAGTCTCAATGCTAAAGCTCGTTTGA

Basic information

species Selaginella moellendorffii
transcript EFJ17139
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaaacaaatcaattgcaaacctttactaaagatttgttcactcgtctcgtagATATTCGAATCTAAATGGCAACGCAATTTACAAGAGCGAGGCTTGTGTTTGATCCCAGTCTCAATGCTAAAGCTCGTTTGA
                          tactaaa  putative branch site (score: 1)
                                           ctcgtctc  putative PPT
                        tttactaaagattt  TA-rich tract