1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaaggcttcgttttgctttgatttgctctccagtttttgaagttctgaagaacttttttgtgtttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGAAACTTACGAGCCAAAGTTGGCGTCATAGGCCCGCCTACCGATCTAGCAT
species | Selaginella moellendorffii |
transcript | EFJ11043 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCACTGCTGAACTTGCGAATCAGAAAGGCTGTGAGAEST: gi|169032485|gb|FE439592.1|FE439592
genomic: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGA
EST: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCACTGCTGAACTTGCGAATCAGAAAGGCTGTGAGAEST: gi|169020459|gb|FE431706.1|FE431706
genomic: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGA
EST: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCACTGCTGAACTTGCGAATCAGAAAGGCTGTGAGAEST: gi|169116479|gb|FE517504.1|FE517504
genomic: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGA
EST: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGAEST: gi|169044666|gb|FE452460.1|FE452460
genomic: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGA
EST: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCATTACTGAACTTGCGAATCEST: gi|169031670|gb|FE437471.1|FE437471
genomic: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATC
EST: GGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGAEST: gi|169025923|gb|FE432884.1|FE432884
genomic: GGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGA
EST: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAG GTGCGAACCGAGGCACCACTGCTGAACTTGCGAATCAGAAAGGCTGTGAGA
genomic: CTATTGCTGGAGTGGAGAATGCGGACGTTATTCTCCTTGTTGGAACACAGgtaaggcttc ... ttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGA
tgatttgctctccagtttttgaagttctgaagaacttttttgtgtttctactcagGTGCGAACCGAGGCACCATTACTGAACTTGCGAATCAGAAAGGCTGTGAGAAACTTACGAGCCAAAGTTGGCGTCATAGGCCCGCCTACCGATCTAGCAT
ctttgat putative branch site (score: 18)
cttttttgtgtttct putative PPT
aactttttt TA-rich tract