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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagctctttcgtttcgattcttttatggacgtcaagcatttgcttgcagggaaaacttaagggtttgctgctcactttgttttcagGCAGAGATATACCCTTTATCACGAATCTTTAAAAGGAAGAGGCCTCAAAGGGTTTCTCCAAACTAGGGCAATGGCTTTGTGGATCCTCACGCACCCGTTT

Basic information

species Selaginella moellendorffii
transcript EFJ09833
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcaagcatttgcttgcagggaaaacttaagggtttgctgctcactttgttttcagGCAGAGATATACCCTTTATCACGAATCTTTAAAAGGAAGAGGCCTCAAAGGGTTTCTCCAAACTAGGGCAATGGCTTTGTGGATCCTCACGCACCCGTTT
                                     tgctcac  putative branch site (score: 2)
                                       ctcactttgttttc  CT-rich tract
                    aaaacttaa  TA-rich tract