1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgtgtgtgtgtgtgtgtgtttttcatgagatgcaaggtgtgcaacattcattgtgtttgttctcttagATCGAAGACGATGACGATAAAATGTGGAATCCAGACACTCCCGAGACAATGAAAGAGCTGCAAGAACGGATCACTCTTTTTCTGCAATGGTAA
species | Selaginella moellendorffii |
transcript | EFJ09826 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
gtgtgtttttcatgagatgcaaggtgtgcaacattcattgtgtttgttctcttagATCGAAGACGATGACGATAAAATGTGGAATCCAGACACTCCCGAGACAATGAAAGAGCTGCAAGAACGGATCACTCTTTTTCTGCAATGGTAA
tttgttctctt CT-rich tract
tttttcat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgtgtgtgtgtgtgtgtgtttttcatgagatgcaaggtgtgcaacattcattgtgtttgttctcttagATCGAAGACGATGACGATAAAATGTGGAATCCAGACACTCCCGAGACAATGAAAGAGCTGCAAGAACGGATCACTCTTTTTCTGCAATGGTAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC