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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtattttcatctaagttacaagctgatgatcttcggatgcagggtgacgcacgctgtaaatgttggggtccatcgaccacgagctcggtctgaacgatcatctagcagatcagcttctagagtgcttacgggagctcgttgtctccacatatagCCAAGTTCAACACGATGAAAAGGAATGGGATTTTATCGACAAGGGGTGCTTAGTGCCTCTTACCGTTGCAGAGGCAC

Basic information

species Selaginella moellendorffii
transcript EFJ26083
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atctagcagatcagcttctagagtgcttacgggagctcgttgtctccacatatagCCAAGTTCAACACGATGAAAAGGAATGGGATTTTATCGACAAGGGGTGCTTAGTGCCTCTTACCGTTGCAGAGGCAC
                       tgcttac  putative branch site (score: 2)
                                       ttgtctcc  putative PPT
                                               acatata  TA-rich tract