1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaggcgttttctcttgttttggttttcatctacttcgtgaactaacagggagagttttccagAATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTCGCAAACCAGAGCCATGTGGATATGGTGACTGTGAATCCGTCAGTGGTTC
species | Selaginella moellendorffii |
transcript | EFJ23694 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCGTGAGCGAGGAGATGTGGAGCGACGTTCAGTATCTCAAGGACACAAGA AATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTCEST: gi|169074669|gb|FE480899.1|FE480899
genomic: TCGTGAGCGAGGAGATGTGGAGCGACGTTCAGTATCTCAAGGACACAAGAgtaggcgttt ... agttttccagAATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTC
EST: TCGTGAGCGAGGAGATGTGGAGCGACGTTCAGTATCTCAAGGACACAAGA AATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTCEST: gi|169049322|gb|FE458233.1|FE458233
genomic: TCGTGAGCGAGGAGATGTGGAGCGACGTTCAGTATCTCAAGGACACAAGAgtaggcgttt ... agttttccagAATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTC
EST: TCGTGAGCGAGGAGATGTGGAGCGACGTTCAGTATCTCAAGGACACAAGA AATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTC
genomic: TCGTGAGCGAGGAGATGTGGAGCGACGTTCAGTATCTCAAGGACACAAGAgtaggcgttt ... agttttccagAATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTC
tttctcttgttttggttttcatctacttcgtgaactaacagggagagttttccagAATGGCTACTGCCTCGCAAAAACTTTGGCCGAGTCGGCTGCCTGGGAGTTCGCAAACCAGAGCCATGTGGATATGGTGACTGTGAATCCGTCAGTGGTTC
aactaac putative branch site (score: 60)
ttttcc putative PPT
ttgtttt TA-rich tract