1 5' 3' | 2 5' 3' | 3 5' 3' |
gtacgctgaagtttcaaaagtttccctgtttgtttatctctctggtggtgctttggtctaaccaagctttttctttctcttgctttttgcttgcacagGTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTCAATCTGCTTGGAATCAAAGGCTCCAATCCCGACTCGCCGGGATTGAATG
species | Selaginella moellendorffii |
transcript | EFJ19556 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CCAACTGTGGCAAGGATCTCTACGTGTCGGTGACAATGCCATCGGTGGAG GTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTCEST: gi|169029368|gb|FE439769.1|FE439769
genomic: CCAACTGTGGCAAGGATCTCTACGTGTCGGTGACAATGCCATCGGTGGAGgtacgctgaa ... gcttgcacagGTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTC
EST: CCAACTGTGGCAAGGATCTTTACGTGTCGGTGACAATGCCATCGGTGGAG GTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTCEST: gi|169025720|gb|FE433630.1|FE433630
genomic: CCAACTGTGGCAAGGATCTCTACGTGTCGGTGACAATGCCATCGGTGGAGgtacgctgaa ... gcttgcacagGTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTC
EST: CCAACTGTGGCAAGGATCTCTACGTGTCGGTGACAATGCCATCGGTGGAG GTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTC
genomic: CCAACTGTGGCAAGGATCTCTACGTGTCGGTGACAATGCCATCGGTGGAGgtacgctgaa ... gcttgcacagGTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTC
ggtggtgctttggtctaaccaagctttttctttctcttgctttttgcttgcacagGTTGGAACGATCGGTGGTGGCACGCAGCTCGCGTCGCAGAGCGCCTGTCTCAATCTGCTTGGAATCAAAGGCTCCAATCCCGACTCGCCGGGATTGAATG
gtctaac putative branch site (score: 10)
ctttttctttctcttg putative PPT
tttttcttt TA-rich tract