1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' |
gtaagcctacttttccaccatctgtcttagcatttctctcgactgttttggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGAGAAGTATCACCTGCGATCCTCCCCGACCTTCTCGTCCGAGGACGCGTAC
species | Selaginella moellendorffii |
transcript | EFJ31523 |
intron # | 26 |
splice site | 3' |
intron type | U2 |
EST: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGG ACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAGGACGAEST: gi|169038589|gb|FE447421.1|FE447421
genomic: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGGgtaagcctac ... ggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGA
EST: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGG ACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGAEST: gi|169088451|gb|FE495497.1|FE495497
genomic: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGGgtaagcctac ... ggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGA
EST: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGG ACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGAEST: gi|169106116|gb|FE507934.1|FE507934
genomic: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGGgtaagcctac ... ggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGA
EST: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGG ACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGAEST: gi|169055981|gb|FE466170.1|FE466170
genomic: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGGgtaagcctac ... ggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGA
EST: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGG ACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGAEST: gi|169028280|gb|FE434066.1|FE434066
genomic: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGGgtaagcctac ... ggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGA
EST: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGG ACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAGGACGA
genomic: TTAGTCTTAGTTCCAGTGGTAGCTTTACTTGGCGATTTCCTCTACAGCGGgtaagcctac ... ggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagcctacttttccaccatctgtcttagcatttctctcgactgttttggctttgcagACTCAGGCGCTGGTTCGCTCCTTACGACTACGAGATCATAGAAGAAGACGAGAAGTATCACCTGCGATCCTCCCCGACCTTCTCGTCCGAGGACGCGTAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT