Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagttttctttcatatgaagttctgcgctcttgttcttgacacgcttgtcttttttgcttccagGAATGATTATGCTGCGGAGTTTGGAATTCAGGTGGCTAAGTCGATGACGTCTCTGCACGCAAGGGTTCTTCCAACTCCGAGTCTGAGGTATAGCAGCAAC

Basic information

species Selaginella moellendorffii
transcript EFJ26136
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttcatatgaagttctgcgctcttgttcttgacacgcttgtcttttttgcttccagGAATGATTATGCTGCGGAGTTTGGAATTCAGGTGGCTAAGTCGATGACGTCTCTGCACGCAAGGGTTCTTCCAACTCCGAGTCTGAGGTATAGCAGCAAC
                         tcttgac  putative branch site (score: 3)
 cttgtcttttttgctt  putative PPT
 tctttttt  TA-rich tract