1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgaggttttagagcttttggatttttccgtgtgttttgcttgctaagcttgagcttttggtggcactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCCCACCGTGAGGTTTGTTTCCAAGATGTTCCATCCCAATA
species | Selaginella moellendorffii |
transcript | EFJ17802 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCEST: gi|169115252|gb|FE515642.1|FE515642
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCEST: gi|169071067|gb|FE480695.1|FE480695
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCEST: gi|169071014|gb|FE480694.1|FE480694
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCEST: gi|169115251|gb|FE515641.1|FE515641
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCEST: gi|169083954|gb|FE493594.1|FE493594
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCEST: gi|169092766|gb|FE494943.1|FE494943
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
EST: GCCGGATGACACTCCCTGGGATGGAG GGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
genomic: GCCGGATGACACTCCCTGGGATGGAGgtgaggtttt ... cactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgaggttttagagcttttggatttttccgtgtgttttgcttgctaagcttgagcttttggtggcactgtacagGGACGTTTAAGCTGACATTGCAATTCACAGAGGACTATCCCAACAAACCTCCCACCGTGAGGTTTGTTTCCAAGATGTTCCATCCCAATA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG