Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtacctgggaaacgtttttctcgtagattgtgtgtggatcctcaagctttgtgcgctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCACAACAGTGGGCCGCGACTCCTGGCGGACAAGCCACGTACCTTGGAACTC

Basic information

species Selaginella moellendorffii
transcript EFJ15021
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169099025|gb|FE501759.1|FE501759
EST:     ATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGTTGCT-                         AATGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGC
genomic: ATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAG-TCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGC
EST: gi|169049240|gb|FE459516.1|FE459516
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169027125|gb|FE435659.1|FE435659
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169074598|gb|FE481179.1|FE481179
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169039940|gb|FE447615.1|FE447615
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169111613|gb|FE513970.1|FE513970
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169038566|gb|FE448035.1|FE448035
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169101979|gb|FE504994.1|FE504994
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169042914|gb|FE452073.1|FE452073
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169054656|gb|FE461596.1|FE461596
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169061470|gb|FE469569.1|FE469569
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCCGAAGCTCTA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTA
EST: gi|169098824|gb|FE503352.1|FE503352
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169040077|gb|FE447050.1|FE447050
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169050118|gb|FE460186.1|FE460186
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169051686|gb|FE457919.1|FE457919
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169039138|gb|FE448293.1|FE448293
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169038227|gb|FE443926.1|FE443926
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169046050|gb|FE453128.1|FE453128
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169095651|gb|FE498342.1|FE498342
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169111614|gb|FE513971.1|FE513971
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169039788|gb|FE449450.1|FE449450
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169103480|gb|FE507379.1|FE507379
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGAATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169039139|gb|FE448294.1|FE448294
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169059127|gb|FE468272.1|FE468272
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169038226|gb|FE443925.1|FE443925
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169095888|gb|FE499736.1|FE499736
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169074597|gb|FE481178.1|FE481178
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169062770|gb|FE470856.1|FE470856
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169047900|gb|FE455965.1|FE455965
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169088671|gb|FE491531.1|FE491531
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169040104|gb|FE447051.1|FE447051
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169034872|gb|FE442315.1|FE442315
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169039838|gb|FE447524.1|FE447524
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169048819|gb|FE456625.1|FE456625
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169044445|gb|FE451069.1|FE451069
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169066493|gb|FE476250.1|FE476250
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169051251|gb|FE459161.1|FE459161
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169038567|gb|FE448036.1|FE448036
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169034857|gb|FE444046.1|FE444046
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169110878|gb|FE512650.1|FE512650
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169045061|gb|FE450918.1|FE450918
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169039109|gb|FE448797.1|FE448797
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169062023|gb|FE470993.1|FE470993
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169064603|gb|FE471334.1|FE471334
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169059595|gb|FE468829.1|FE468829
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169061860|gb|FE470154.1|FE470154
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169034711|gb|FE445603.1|FE445603
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169088606|gb|FE493897.1|FE493897
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169024210|gb|FE432523.1|FE432523
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169115868|gb|FE517647.1|FE517647
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169043615|gb|FE452683.1|FE452683
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169056756|gb|FE465983.1|FE465983
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169074087|gb|FE483502.1|FE483502
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169055786|gb|FE465365.1|FE465365
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169034568|gb|FE446461.1|FE446461
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169036912|gb|FE446030.1|FE446030
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169055888|gb|FE465102.1|FE465102
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169060155|gb|FE468141.1|FE468141
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169054657|gb|FE461597.1|FE461597
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169065998|gb|FE473782.1|FE473782
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169088672|gb|FE491532.1|FE491532
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169074973|gb|FE482191.1|FE482191
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169058460|gb|FE466357.1|FE466357
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169044426|gb|FE451063.1|FE451063
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169045060|gb|FE450917.1|FE450917
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169058461|gb|FE466358.1|FE466358
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169068772|gb|FE478465.1|FE478465
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169040823|gb|FE447874.1|FE447874
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169043976|gb|FE454370.1|FE454370
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169049278|gb|FE459554.1|FE459554
EST:     AGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: AGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169105983|gb|FE504343.1|FE504343
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169066079|gb|FE473863.1|FE473863
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169046051|gb|FE453129.1|FE453129
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169043616|gb|FE452684.1|FE452684
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169065343|gb|FE473244.1|FE473244
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169047132|gb|FE457213.1|FE457213
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
EST: gi|169105982|gb|FE504342.1|FE504342
EST:     GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTC                         CCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA
genomic: GATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 223

CTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGAACGATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCAGTCgtaagtacct ... ctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCACAACAGTGGGCCGCGACTCCTGGCGGACAAGCCACGTACCTTGGAACTC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aacgtttttctcgtagattgtgtgtggatcctcaagctttgtgcgctgctttcagCCTGGATGCCTCATTCCGGAAGCTCTAGGACTAGGAAACTGGGTTGAGGCACAACAGTGGGCCGCGACTCCTGGCGGACAAGCCACGTACCTTGGAACTC
                                             ctgctttc  CT-rich tract