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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacgtgctcgcttggacgacctgcactgctcctaacagatggatggtgtgctaatgcagAGCTGTGCTGTTGGATGTGCACGGGAGAGCGGCAAGCAGCTCGTATCAGGAGCCTGTATCTCAAGGCCATTTTGCGGCAGGACATCCCATTCTTTGACAC

Basic information

species Selaginella moellendorffii
transcript EFJ10284
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ10284 (Selaginella moellendorffii), 3'ss of exon 2
lower sequence: PP1S188_78V6.1 (Physcomitrella patens), 3'ss of exon 3
-----------------------------------------------------------------------------------------------gtaacgtgctcgcttggacgacctgcactgctcctaacagatggatggtgtgctaatgcagAGCTGTGCTGTTGGATGTGCACGGGAGAGCGGCAAGCAGCTCGTATCAGGAGCCTGTATCTCAAGGCCATTTTGCGGCAGGACATCCCATTCTTTGACAC
                                                                                                ||    | |     |    |    | |   |  |   | |||  |    | || | | |||  | | ||| ||||||   || |||||||| |||||||||||||||||||| |||||||||||| | ||| |  |||| ||  | || || |||||   
gtgagtcttctcgttgacatttgatgaacttttgcttcagtttttagtgttattccaccttttcgtgagaaatgagtaaatgctggtgctctcaaatactaagataagccgattaaagcactcacattttcttaaatgttttacttcctga-gtagAAATTTCCTGCTGGATGATAACTGGAGAGCGTCAAGCAGCTCGTATCAGGAGTCTGTATCTCAAGACGATTCTCAGGCAAGATGTTCCTTTTTTTGATCA