1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtactgtgaagcgtttaatgcgttgcgaggatttatgctgtgaattttttttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTTTTGCGTTCCAAGCCGCGAGAAGGCCATCCAACAATCCAAAG
species | Selaginella moellendorffii |
transcript | EFJ07601 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAG GAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTTEST: gi|169094623|gb|FE494549.1|FE494549
genomic: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAGgtactgtgaa ... tttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTT
EST: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAG GAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACNNNNNNEST: gi|169067005|gb|FE475982.1|FE475982
genomic: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAGgtactgtgaa ... tttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTT
EST: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAG GAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTTEST: gi|169044684|gb|FE452478.1|FE452478
genomic: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAGgtactgtgaa ... tttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTT
EST: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAG GAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACNNNNNNEST: gi|169058559|gb|FE464285.1|FE464285
genomic: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAGgtactgtgaa ... tttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTT
EST: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAG GAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTT
genomic: GCTCGTTAGGGAAGCGCATTCGCGAGGAGCAAATATCATCCTTATCCAGgtactgtgaa ... tttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTT
tgtgaagcgtttaatgcgttgcgaggatttatgctgtgaattttttttggatcagGAGCTCTTCGAGGGATACTACTTTTGCCAGGCGCAAAGAGAGGACTTCCTTTTGCGTTCCAAGCCGCGAGAAGGCCATCCAACAATCCAAAG
gtttaat putative branch site (score: 17)
tttttttt putative PPT
tgtgaatttttttt TA-rich tract