1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtgccggatttcattcctcgtaatgtttttgtccctgattttattcccgtttttatctcagGGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATGGATGGCCGCTATTTGAGAGACGTGTGGTAACAGCAACTAGGAGGTAAAC
species | Selaginella moellendorffii |
transcript | EFJ20231 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: GAATGGCAAAGGACGTGCACCGCACACTCCACACGATAGTCCAGGAACAG GGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATGEST: gi|169025172|gb|FE434109.1|FE434109
genomic: GAATGGCAAAGGACGTGCACCGCACACTCCACACGATAGTCCAGGAACAGgtgccggatt ... tttatctcagGGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATG
EST: GAATGGCAAAGGACGTGCACCGCACACTCCACACGATAGTCCAGGAACAG GGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATGEST: gi|169025077|gb|FE433858.1|FE433858
genomic: GAATGGCAAAGGACGTGCACCGCACACTCCACACGATAGTCCAGGAACAGgtgccggatt ... tttatctcagGGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATG
EST: GAATGGCAAAGGACGTGCACCGCACACTCCACACGATAGTCCAGGAACAG GGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATG
genomic: GAATGGCAAAGGACGTGCACCGCACACTCCACACGATAGTCCAGGAACAGgtgccggatt ... tttatctcagGGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATG
gatttcattcctcgtaatgtttttgtccctgattttattcccgtttttatctcagGGCTCGTTGGACAGCTCCAAAACAGAGGCTTTTGTCAAAAAGCTCCAGATGGATGGCCGCTATTTGAGAGACGTGTGGTAACAGCAACTAGGAGGTAAAC
ccctgat putative branch site (score: 12)
ttttattcccgttttt CT-rich tract
taatgttttt TA-rich tract