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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagctctttgctttctggttggatatgacgagctcgtacagGTTGAAAACATCATGTCCCCACACTCAAAAAGTTTGTATGCTTGTGTTGGCGAAAGTACTCACGCATACCAAAGCCCTTCGAAAGATCTTACTGCAATTA

Basic information

species Selaginella moellendorffii
transcript EFJ23894
intron # 13
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ23894 (Selaginella moellendorffii), 3'ss of exon 13
lower sequence: Vv04s0008g02780.t01 (Vitis vinifera), 3'ss of exon 16
--------------------------------------------------------gtaagctctttgctttctggttggatatga-cgagctcgtacagGTTGAAAACATCATGTCCCCACACTCAAAAAGTTTGTATGCTTGTGTTGGCGAAAGTACTCACGCATACCAAAGCCCTTCGAAAGATCTTACTGCAATTA
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cttgctctcaatgtatgaaccaaaaaatgaaaatcatctgatgttgaaatctctttttacgtgattggttccattaataaaaatcatctgatgtctacagATGGATGCTTTAATCTCACATAGTTCTAAAAGTTACTATGCTTGTGTTGGAGAGAGTACTCATGCTTATCAGAGCCCTTCAAAAGACCTAACTGCCATTA